FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences325
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA14344.0No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT7021.53846153846154No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG288.615384615384615No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG113.3846153846153846No Hit
ATGACCGGCCCACGAGACACTTAAAGCAGTGGCATCAATCATCACAGGGTT92.769230769230769No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA41.2307692307692308No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACGTAGAG30.9230769230769231No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGTAG30.9230769230769231No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACGTAGA30.9230769230769231No Hit
ATGACCTGCCCACGAGACACTTAAAGCAGTGGCATCAATCATCACAGGGTT20.6153846153846154No Hit
GGTTTCCCAGTCCTGACTCTTATACACATCTCCGAGCCCACGAGACGTAGA20.6153846153846154No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAG20.6153846153846154No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCACGAGACGTAGAG10.3076923076923077No Hit
GGTTTACCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.3076923076923077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTACGATCCCACGATACGTAGA10.3076923076923077No Hit
CAGAGGAAGCTGGTACTAGGTTAAAAATGTTGTGTTTACTAATAGTGATGC10.3076923076923077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGACT10.3076923076923077No Hit
TGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.3076923076923077No Hit
GGTTTCCCAGTCCCTGGGTGGGGACGGAGAAATGAACGTTCAGATTGAGAT10.3076923076923077No Hit
GGTTACCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.3076923076923077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACGTAGAGGAAT10.3076923076923077No Hit
TCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCG10.3076923076923077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACGTAGA10.3076923076923077No Hit
GCAAAGGCAAATAAATCCTTGTTTTGTCTTCACCCATGTAATAAAGCTGTC10.3076923076923077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACGTAGAG10.3076923076923077No Hit
TTAAATAAAGAAGGTAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGT10.3076923076923077No Hit
TGTTCAGAGGAGGGGATCCTAGCAGAAGTGGCCAGAAAGGTAGGAGAAATG10.3076923076923077No Hit
CCATGTCCCCACCCACTTCCCCTACCCAGTTTGCCATAATTAAAACTTGGG10.3076923076923077No Hit
GGTTTCCCATTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.3076923076923077No Hit
GGTTTCCCAGTCACGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTC10.3076923076923077No Hit
GGTTACCCAGTCCTGTCCTTATACACATCACCGAGCCCACGAGACGAATAG10.3076923076923077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTATAGGAAT10.3076923076923077No Hit
ATCCTCAATTGGTGCAGCATGATACCAATTGGTGACGTTCCCTGTGCCTGT10.3076923076923077No Hit
GTCAGGTGACTGGGATATAGCTACCGTTGAACTACACTTTGAGAAGTAGAC10.3076923076923077No Hit
GGTTTCCCAGACCTGTCTCTTATACAAATATCCGAGCCCACGATACGTATA10.3076923076923077No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.3076923076923077No Hit
CCTTTCATCTCGCCTTTATTGTTCACTATGACTCCTGCATTATCTTCAAAA10.3076923076923077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACTAGACGTAGAGGAAT10.3076923076923077No Hit
GGTTTCCCAGTCCACGAGACACTTAAAGCAGTGGCATCAATCATCACAGGG10.3076923076923077No Hit
CCCATATGGTCTCCCTCCGCCGCCCATTTCAGCAACTGTTGTTCCTTCAGG10.3076923076923077No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACGTAGA10.3076923076923077No Hit
GGTTTCCCAGTCCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAA10.3076923076923077No Hit
TTTCTCCTTCCTATTCCAACTCCCACGGCGCTCTGCTGCCTCTCCTGCTGC10.3076923076923077No Hit
GGTTTCCCAGTCCTGTCTCTTTTACACATCTCCGAGCCCACGAGACGTAGA10.3076923076923077No Hit
TTTTATATAACAAGGGTAAAAGGCTATGACATATTATAATACTGGCACACA10.3076923076923077No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.3076923076923077No Hit
GTGATAGGCCGTCTGCAAACTAGGGAACTAGGGAAACCAGTAGCTCATTTC10.3076923076923077No Hit
GGTTTCCCAGTCCTATCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.3076923076923077No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGATGAAT10.3076923076923077No Hit
GTATATCATCTCCGTGAAGGGGATCAAGGGACGGCTGAACAGACTTCCCGC10.3076923076923077No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.3076923076923077No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAG10.3076923076923077No Hit
AGAAGAAAAGGAGGTTGAACTACAAGTAAGATACCCAATACTAAAGATTTC10.3076923076923077No Hit
CACAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTG10.3076923076923077No Hit
GATCTAAACCCAGGTCTTTGGACCTCAAGTTCAGTTGTCTACCTTTGCCTT10.3076923076923077No Hit
GGATTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.3076923076923077No Hit
GGGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG10.3076923076923077No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)