FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC22144.2No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGTACTAGAT7214.399999999999999No Hit
ATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT5511.0No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG367.199999999999999No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG153.0No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC40.8No Hit
TGTTAGAGGTGGGGACGGGGACTGGGGCTTTTTTGCCTCACCCTGATGATT30.6No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACCGTACT30.6No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACCGTACT30.6No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGAGACCGTAC20.4No Hit
ATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT20.4No Hit
GGTAATCCAGGTGGCTTTGGGAATCAGGGTGGATTTGGTAATAGCAGAGGG20.4No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACT20.4No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACCGTAC20.4No Hit
GGAGTGCAGTGGCGCATCTCGGCTCACTGCAACTTCTGTCTCCCGGGTTCA20.4No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC20.4No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG20.4No Hit
GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT20.4No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGTACTAGATC20.4No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGTTGCTTGGCGAGG10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCATAC10.2No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCCGCTTGGCGAGG10.2No Hit
ATGACCTGCCCAGCAGTCTCTGCCTCGCCAATCGGCTCATGTTGGAGACGT10.2No Hit
ATATTCACCCAGCTGATGAAATATATCACCAAGATCCTAGAATTCCATGTT10.2No Hit
GCCAGTCCACAATACACATCTCCGAGCCCACGAGACCGTACTAGATCGCGT10.2No Hit
GGTCTCCTGGGGGGACAGAACTAGTGGTTTCAATGGTGTGAGGACATAGGC10.2No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCACACGAGACCGTA10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATAAAAATCTCCGATCCCACGATACCGTAC10.2No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCGTA10.2No Hit
TGTTTATGCGGGGAAACGCCATATCGGGGGCACCGATTATTAGGGGAACTA10.2No Hit
GCACTAGTTGGTCCATCTGGCATTGGAAGTGAGCCAATAGCATCTCCTTGA10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACCTCCGAGCCCACGAGACCGTACTA10.2No Hit
CGTTTCCAAGTCCACAATACTGACGACTACAAAAACATCTCAATACCTAGA10.2No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCCTGGCGAGG10.2No Hit
GGTTTCCCAGTCCTTTCTCTTATACACATCTCCTAGCCCACGAGACCGTAC10.2No Hit
CAGAGATGGCTGGGTTTCCGTTTGCCTGAATTTCCACGTGCTATGGACGCC10.2No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGAGGTTG10.2No Hit
ATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT10.2No Hit
GGTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGTACTAGATCT10.2No Hit
ATACAATTTTAATTATTAAAAAAACATTTAAAAACAAATTATTAATAATAT10.2No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACCGTACT10.2No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCAGAGCCCACGAGACAGTAC10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACCGTAC10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACCTTAC10.2No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACAAGAGCCGCTTGGCGAGG10.2No Hit
CATTAATTCCACATTTAAGTGACTCAATGGATTTAAGTACTATTCTCCATA10.2No Hit
GTTTTGACACTCTCACGTTGGCTGACGACCCATAAGAGGCCAGTTAAGAAA10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACCGTACT10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACCGTAC10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGAACTTAC10.2No Hit
GGTAACCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGTACTAGAT10.2No Hit
CCTAGAATGTCAGAAGACCTGAGTAGGTGTTCAGCAATAGAGCTGGGGCCA10.2No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCTGTCT10.2No Hit
GGTTTCCCAGTCCATTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.2No Hit
ACCCAAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTATCTGC10.2No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTA10.2No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAAC10.2No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCGGCTTGGCGAGG10.2No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGTGCCAGTC10.2No Hit
GGTTTCCCAGTCCGTCTTTATACACATCTCCGAGCCCACGAGACCGTACTA10.2No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGTAATAGAT10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTACGAGCCCACGAGACCGTAC10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAA10.2No Hit
GGTTTCCCAGGCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.2No Hit
ACTATAACACACAAAAATACTGACTACTCAAAAAATACAACATACTACACC10.2No Hit
GAGTACATGGGAAGCAGTGGCATCAATCATCACAGGGTTGGACCTGTCTCT10.2No Hit
GGCTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC10.2No Hit
CCTTATTTAAACGTTTTATTACTCACTAATAAAAATAACAGGAAAATTGTA10.2No Hit
CCCTGAAACTACAGCCATCCATCTCATTCTTTTATCATTCTTAGAAGAAAA10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACCGTACT10.2No Hit
ATGACCTTCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT10.2No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGTACTATAT10.2No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCTAGCCCACGAGACCGTAC10.2No Hit
ATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCTCATGTTGGAGACGT10.2No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACCGTAC10.2No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.2No Hit
GGTTTACCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC10.2No Hit
ACTGAAAGTGAGGTTTCTCAGTGTCTGGGGTAAAATTGCAACTTTTTGGAA10.2No Hit
GGGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC10.2No Hit
GGTTTCCCAGTCCCTATACACATCTCCGAGCCCACGAGACCGTACTAGATC10.2No Hit
ATGACCGGCCCAGCAGTCTCTAATACACATCTCCGAGCCCACGAGAGGTTG10.2No Hit
CCTTACTTCCTTCCCTTTCTCAGGCTTTTTTTTACTGTTCCTTTCCCTACC10.2No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGG10.2No Hit
GCTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.2No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGATCCCAAGAGACCGTAC10.2No Hit
GGTATCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTAC10.2No Hit

[FAIL]Adapter Content

Adapter graph