FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500
Sequences flagged as poor quality0
Sequence length51
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA23747.4No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8116.2No Hit
GACTGGCACGCTCCATGACCGTTTCCCAGTCCACTATACTGACGTCTCCAA5911.799999999999999No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT357.000000000000001No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT153.0No Hit
CCTAATCATCAGGGTGAGGCAAAAAAGCCCCAGTCCCCGTCCCCACCTCTA30.6No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGAATTAGAC30.6No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA30.6No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA20.4No Hit
CCCATATTACTACCTTGATTGTTTCCCAAACCAGCTCCACCCCCTCTGCTA20.4No Hit
AACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT20.4No Hit
GAGTTGGTAGGGAAAGGAACAGTAAAAAAAAGCCTGAGAAAGGGAAGGAAG10.2No Hit
CCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGG10.2No Hit
AACTGGTAAACCCTGTCACAAAAACACATAAAAATAATACCACTAAATATA10.2No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCTACGAATTAGA10.2No Hit
GACAAGAAAGAACCATTACAAGAAAAGAACTCACTACAACGACAACACGAA10.2No Hit
GTCCAACCTATCTATGTCACGGAAAAAAAAAAAAAAAAAACCACGGAAAAT10.2No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCAGACGAATTAGA10.2No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCAGCT10.2No Hit
ATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT10.2No Hit
CTAAATACAAATATAACAAAAAAATAATACATACTAACACATAAAAAAATA10.2No Hit
CCTATGTCCTCACACCATTGAAACCACTAGTTCTGTCCCCCCAGGAGACCC10.2No Hit
GTTCAAGGAGATGCTATTGGCTCACTTCCAATGCCAGATGGACCAACTAGT10.2No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGAATTAG10.2No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTTAGA10.2No Hit
GACTGGGAAACCCTGTCTCTTATACACATCCGACGCTGCCGACGAATTAGA10.2No Hit
GACTGGGAAACCCTGTCTCTTATACATCTGACGCTGCCGACGAATTAGACG10.2No Hit
CCAGACATAGTAAGGATTGGCAGACTGAGAGCTCTTTCTTGATTCTATGGG10.2No Hit
GACTGGCACAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGTCA10.2No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAGGCGGCT10.2No Hit
GCCAAACTGCTCGAAATATTGCTTTACATCTTCCACTACTGTGTTCGCAGA10.2No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTTAGA10.2No Hit
CAAAATGGAACAGTTTGAACATGGAATTCTAGGATCTTGGTGATATATTTC10.2No Hit
NACTGCCACCAACAATAACCGCNCACCAATAACATCCGACCCANACCGCAC10.2No Hit
GACTGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGTCA10.2No Hit
GACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA10.2No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCGGCT10.2No Hit
GACTGGGATACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA10.2No Hit
CTGGGCCGGTCATCTGTATCTTATACAAATCTGACGCTGCCGACGAATTAT10.2No Hit
GTCCAACCCTGTGATGATTGATGCCACTGCTTCCCATGTACTCCTGTCTCT10.2No Hit
GCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGCTGTCT10.2No Hit
GTTCAGAACCACTGCGGCGTCCAGAGCACGTGGAAATTCAGGCACACGGAA10.2No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACCTGCCGACGAATTAGAC10.2No Hit
CCTGAGATGTTGATAAATGCTGAATCCAGAAAGCCTTTTTACCATGCATGT10.2No Hit
CTCCAACCTAACTATGTCTCTTAAAAAAATAAAAAACAAACCACGAAATAG10.2No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACTAATTAGA10.2No Hit
GACTGGGAAACCCTGTCTCTTATACATATCTGACGCTGCCGACGAATTAGA10.2No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.2No Hit
GACTGGGAAGCCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA10.2No Hit
GACTGGCACGCTCCATGACCGTTTCCCAGTCCACTATACTGACGTCTCCTA10.2No Hit
GTCTAAGCTCAGGTTTTCATATGACCAGAGTCCTTTTTCTTCTAAGAATGA10.2No Hit
NACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA10.2No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT10.2No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGAC10.2No Hit
CCTTCAGGAGACTTCTCTCTCGCCGAAAAAAAAAAAAAAAAAAAAAAAAAA10.2No Hit
ATGCATTTGTAATAATCTTCTTCATAGTAATACCCATCATAATCGGAGGCT10.2No Hit
GCTACTTGAGAGGCTGAGGCAGAGAATCGCTTGAATGCTTGAACCCGGGAG10.2No Hit
AAAGGCACAAAAAAAAAACCCAATCCAAACCCCAAAAAATAAATAAAAAAA10.2No Hit
CAATTTAACCAACAATGAAAGACAAAGCACTATCAGCCTAGCCAAAAAGCT10.2No Hit
CCTGTGGGGTTATATCCAAATTCCTTAGGTAGTGTTCATTTTGGCCCCAGC10.2No Hit
GCTACTTGAGAGGCTGATGCAGAGAATCGCTTGAATGCTTGAACCCGGGAG10.2No Hit
TCATCTGTGTGTGTTCATAGGCATCAGGTCTGCTGGTGGAGCTCTTCTCAA10.2No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAACT10.2No Hit
GGGGGGGGTGGGGGGGGGGGGGTGGGGTGGGGGGGGGGGGGGGGGGGGGTG10.2No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAG10.2No Hit
CAATGCCACTAATAATACTAAAAAAAAAAAAAAAACATCACCACAAAAAAA10.2No Hit
GACTGGAAACCCTGTCTCTTATACCATCTGACGCTGCCGACGAATTAGACG10.2No Hit
ACTGGCACGCTCCATGACCGTTTCCCAGTCCACTATACTGACGTCTCCAAC10.2No Hit
AAATACTACATCAAAGAAAAAACAAAAATAAAAAATCAAACTTAAAAAAAA10.2No Hit

[FAIL]Adapter Content

Adapter graph