FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20790
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1885890.7070707070707No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2341.1255411255411256No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA1300.6253006253006254No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT820.39442039442039445No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT480.23088023088023088No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT350.16835016835016833No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT340.16354016354016354No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT340.16354016354016354No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT320.1539201539201539No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT280.13468013468013468No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT270.12987012987012986No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT250.12025012025012026No Hit
GACTGACACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT240.11544011544011544No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT240.11544011544011544No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT240.11544011544011544No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT240.11544011544011544No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTC220.10582010582010583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)