FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3709
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG306682.66379077918576No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGC1614.340792666486924No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAGGCATGAT852.291722836344028No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG170.45834456726880557No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC130.35049878673496904No Hit
ATGACCGGCCATGGTCAACGACCCTCCAGTACCTGCCTTACTGTGGGCCCA130.35049878673496904No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG120.3235373416015098No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC110.29657589646805066No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGTGAGG110.29657589646805066No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG90.24265300620113237No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG80.21569156106767323No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG70.18873011593421407No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG70.18873011593421407No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG70.18873011593421407No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG60.1617686708007549No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG60.1617686708007549No Hit
GGGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG60.1617686708007549No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTTGCGAGG60.1617686708007549No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGATTGGCGAGG60.1617686708007549No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC60.1617686708007549No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG50.13480722566729578No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGA50.13480722566729578No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC50.13480722566729578No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAGG40.10784578053383662No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGTCGAGG40.10784578053383662No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGAGAGG40.10784578053383662No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG40.10784578053383662No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC40.10784578053383662No Hit
GGTTTCCCAGTCCACTATATTGACGTCTCCAACATGAGCCGCTTGGCGAGG40.10784578053383662No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGATG40.10784578053383662No Hit
GGTTTCCCAGTCCACTAAACTGACGTCTCCAACATGAGCCGCTTGGCGAGG40.10784578053383662No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)