FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28771
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG2577389.57978520037537No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC3711.2894928921483437No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCTCTCTACAT1580.5491640888394564No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1320.4587953147266345No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1000.34757220812623824No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC880.30586354315108966No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG770.2676306002572034No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC740.2572034340134163No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG590.20506760279448058No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG540.18768899238816866No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG490.17031038198185672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG470.16335893781933197No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG440.15293177157554483No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC440.15293177157554483No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGTGAGG430.14945604949428243No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG410.14250460533175768No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCTAGG400.13902888325049528No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC390.1355531611692329No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTTGCGAGG360.12512599492544577No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGA350.12165027284418337No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG310.10774738451913386No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCTGCTTGGCGAGG290.10079594035660908No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)