FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71722
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG6533891.09896544993168No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG2700.3764535289032654No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC2660.37087643958618No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC2490.347173809988567No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1960.2732773765371852No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG1790.24957474693957224No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1660.23144920665904462No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1480.20635230473216032No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1440.20077521541507487No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG1280.17846685814673324No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1260.17567831348819052No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG1240.1728897688296478No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG980.1366386882685926No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG960.13385014361004993No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC960.13385014361004993No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTTGCGAGG940.1310615989515072No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG900.1254845096344218No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCTAGG900.1254845096344218No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT850.11851314798806503No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG850.11851314798806503No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC850.11851314798806503No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGTGAGG850.11851314798806503No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC840.11711887565879367No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCTGCTTGGCGAGG790.11014751401243691No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGA790.11014751401243691No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCTGCTTGGCGAGG770.1073589693538942No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGATG740.10317615236608016No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC720.10038760770753744No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG720.10038760770753744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)