FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71722
Sequences flagged as poor quality0
Sequence length51
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT6556491.41407099634701No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCAGCT1960.2732773765371852No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1880.2621231979030144No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA1850.2579403809152004No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1810.25236329159811494No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1340.18683249212236133No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1330.18543821979309No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1250.17428404115891916No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1200.1673126795125624No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1090.1519756838905775No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCAGCT980.1366386882685926No Hit
GACTGACACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT870.12130169264660774No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCAGCT870.12130169264660774No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCAGCT850.11851314798806503No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCTC830.11572460332952231No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCAGCT820.11433033100025096No Hit
GACTGGCACGCTCCATGACCGGCACAGCAGTCTCTGCCTCGCCAAGCAGCT780.10875324168316555No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCAGCT770.1073589693538942No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCAAAGCAGCT760.10596469702462284No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT730.1017818800368088No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTATGCCTCGCCAAGCAGCT730.1017818800368088No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCATCGCCAAGCAGCT720.10038760770753744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)