FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences684
Sequences flagged as poor quality0
Sequence length51
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG26438.59649122807017No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC21932.01754385964912No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10615.497076023391813No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG71.023391812865497No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTATC50.7309941520467835No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACGCTAC30.43859649122807015No Hit
GGTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG30.43859649122807015No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACGCTAC20.29239766081871343No Hit
GGTTTCCCAGTCCACTAACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC20.29239766081871343No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG20.29239766081871343No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC20.29239766081871343No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC20.29239766081871343No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGGTT10.14619883040935672No Hit
CTTGAGAGCAGGCACAGTGCTGGGAACACTAGGCCCCTTCGGGACAAACCA10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACACACTCCGAGCCCACGAGACGCTACGCTATC10.14619883040935672No Hit
GGTTTCCCAGTCCGCTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGATTGGCGAGG10.14619883040935672No Hit
CCCAATGAGGTCAGGGCCCAGAGTGCTAAAAGGCAGAAATGGAATAAAGAG10.14619883040935672No Hit
CCGTCCCAAAAATAGTTACACCTCCTATCTCTAAAAATATAAAAACAATTC10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGTAC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGGGCCCACGAGACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACATCTCCGAGCCCACGAGACGCTACGC10.14619883040935672No Hit
GGTTTCCCAGTACTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCCGAGACGCTACG10.14619883040935672No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
CCTGTTAGTGTTCTACAATTCCTTTCTCCTTAATTTTTCTCCGCTTTACAA10.14619883040935672No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATTATACGATTGGCTAGG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACGCTACG10.14619883040935672No Hit
ACGGGCTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAACTACGAAC10.14619883040935672No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATTACACATCTCCGAGCCCACGAGACGCTA10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTACGATCCCACGATACGCTAC10.14619883040935672No Hit
GGTTTCACAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10.14619883040935672No Hit
GGGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGTAC10.14619883040935672No Hit
AGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10.14619883040935672No Hit
CCTTAATAGCATCTCATTTTATTGTGACTTTACTTTTTGTGTTGTTTGGTG10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG10.14619883040935672No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.14619883040935672No Hit
GGATTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10.14619883040935672No Hit
GGTTTCCTAGTCCTCTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGTGAGG10.14619883040935672No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
CATACTGTGGTATATGAAGCACATAGTACAGGGCTGGTAAGTAATACACCT10.14619883040935672No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACGCTACGCTAT10.14619883040935672No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACAAATCTCCGAGCCCACGATACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG10.14619883040935672No Hit
GGTTTCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTTATACACATCTCCGAGCCCACGAGACGCTA10.14619883040935672No Hit
CTTGAGAAAAATAAACTATTGAGCTAAAATGTGGAAACAAATCACTTCATA10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGCGTGCCAGTCCTGTCTCTTATACACATCT10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATAC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACACGAGCCGCTTGGCGAGG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTATCTTATACACATCTCCGAGCCCACGAGACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG10.14619883040935672No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTTCTTATACACATCTCCGAGCCCACGAGACGCTACG10.14619883040935672No Hit
GCTTACCCACCGGGTCCTGCGCCGTCAGCACAAGCCACGCTTCACCACCAA10.14619883040935672No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.14619883040935672No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.14619883040935672No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGCTA10.14619883040935672No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACGCTACG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATATCCGAGCCCACGAGACGCTAC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGT10.14619883040935672No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTAC10.14619883040935672No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGTCGAGGC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATAATGACGTCTCCAACATGAGCTGCTTGGCGAGG10.14619883040935672No Hit
GGGAAAGGAGGCCCTGAGCAGTGCAGCAGAGCTATGTAAAGTGCTGTCTCT10.14619883040935672No Hit
GGTTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.14619883040935672No Hit
CCTTGCAGATGGCTCTTAATGGCAAACCTGCACCTCCACCTCAGAGCCAGA10.14619883040935672No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.14619883040935672No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGTGAGG10.14619883040935672No Hit

[FAIL]Adapter Content

Adapter graph