FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215378

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215378
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences327
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGAT12538.226299694189606No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG11133.94495412844037No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG206.116207951070336No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG103.058103975535168No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG30.9174311926605505No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGAT20.6116207951070336No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCGAG20.6116207951070336No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACCGAGG20.6116207951070336No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACCGAGG20.6116207951070336No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG20.6116207951070336No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACCGAGGC20.6116207951070336No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGATC20.6116207951070336No Hit
GCCAAATATGTGTCTTTCCAGATAAAAATCTTGTTATTAAACTAGTTTGGT10.3058103975535168No Hit
GGTTTCCAGTCCACTATACATCTCCGAGCCCACGAGACCGAGGCTGATCTC10.3058103975535168No Hit
GGGAGATAGTTGGTATTAGGATTAGGATTGTTGTGAAGTATAGTACGGATG10.3058103975535168No Hit
GGTTTCCCAGTCCACTATACACACTCCGAGCCCACGAGACCGAGGCTGATC10.3058103975535168No Hit
GCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCCTGTC10.3058103975535168No Hit
CCTGTAGTCCCAGCTACTCAGGAGACGGAGGCAGGAAGATTGCTTGAACCA10.3058103975535168No Hit
GGCAGCGCCGCCGAGACAACTCGGCCCTGATCAGGGTCAGCCTGTCTCTTA10.3058103975535168No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG10.3058103975535168No Hit
GTGATGGGGAGGACGGGAGGTGGAGAAGTAAATGGGGGAGGGGTTCCCATT10.3058103975535168No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGC10.3058103975535168No Hit
GGTTTCACAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3058103975535168No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCCGAGCCCACGAGACCGAGGC10.3058103975535168No Hit
GTCTCGAAGGATGTTGCCCTCGGGCTTCAGGGTCCTAAGCGAGTCTGTCAG10.3058103975535168No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCCCGAGCCCACGAGACCGAGG10.3058103975535168No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACCGAGGCT10.3058103975535168No Hit
GGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGC10.3058103975535168No Hit
ATGACCGGCCCAGCTGTCTCTTATACACATCTCCGAGCCAACGAGACCGAG10.3058103975535168No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC10.3058103975535168No Hit
GTGCTGGAAGGTCGGAAGGAGAAGTGTTATAAGCTTTGAATGTAAGCCCCG10.3058103975535168No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCACAAGATACCGAGGCTGAT10.3058103975535168No Hit
GGTTCCCAGTCCTGTCTCTATACACATTCCGAGCCCACGAGACCGAGGCTG10.3058103975535168No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACGTGAGCCGCTTGGCGAGG10.3058103975535168No Hit
GGTTTACAGGGCTGCCTCCCACCCCCGTCATATTTACCTGTCTCTTATACA10.3058103975535168No Hit
CCACTGCTGCCAGCGAGAGCCGCGGGAGAGTGTGCAGCCGAGTCACTACTG10.3058103975535168No Hit
CCATATTGGCCAGGTTGGTCTCGAACTCCTCACCTCAGATGACCCACCCGT10.3058103975535168No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTTAT10.3058103975535168No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGC10.3058103975535168No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCTCTTGGCGAGG10.3058103975535168No Hit
CTTTACGCCCAGTGATTCCGAGCAACGCTAGCCCCCTTCGTATTCTGTCTC10.3058103975535168No Hit
GCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCG10.3058103975535168No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGAGGCTGATC10.3058103975535168No Hit
GATTTCCCAGTCCACTATACTCATCTCCGAGCCCACGAGACCGAGGCTGAT10.3058103975535168No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG10.3058103975535168No Hit
GGTTTCCCAGTCCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG10.3058103975535168No Hit
GCACTTTGGGAGCCTGAGGTGGGTGGATCACGAGGTCAGGAGATCAAGACC10.3058103975535168No Hit
AGTACACCAGCTCGAAGTAAGAGTGTGCAAGGGACGCAATAGATCAACCAC10.3058103975535168No Hit
AGTAAGCTATGGGGAACAGGTTGGGAGGTGGCCAGTGCTCCTGCCAGCTGT10.3058103975535168No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGATACCGAGG10.3058103975535168No Hit
GCCCACGGCAGGGGCTATTAATTAGCCAGTGGAAGGGTAACTAACAACAAC10.3058103975535168No Hit
GGTTTCCCAGTCCACAATACACATCTCCGAGCCCACGAGACCGAGGCTGAT10.3058103975535168No Hit
ACTAATGGTTCCTTTATCATAGTTTTCCTAATTCTTGTTTTATGGATACAA10.3058103975535168No Hit
GCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGCTGAT10.3058103975535168No Hit
GGTTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGG10.3058103975535168No Hit
GCATAGTAGGGAGGATATGAGGTGTGAGCGATATACTAGTATTCCTAGAAG10.3058103975535168No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)