FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences327
Sequences flagged as poor quality0
Sequence length51
%GC74

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13440.97859327217125No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10833.02752293577982No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT226.727828746177369No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT113.3639143730886847No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA30.9174311926605505No Hit
GACTGGGAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG30.9174311926605505No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG20.6116207951070336No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.6116207951070336No Hit
GACTGGGAAACCCTGTCTCTTATATACATCTGACGCTGCCGACGACGGAGA20.6116207951070336No Hit
GACTGGGAAACCCTGTCTCTTATACACACCTGACGCTGCCGACGACGGAGA20.6116207951070336No Hit
AACTGGGAAACCCTGTCTCTTATACACATCAGACGCTTCCTACTACTGAGA10.3058103975535168No Hit
GACTGGAAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.3058103975535168No Hit
GGTCACTGGATCCTGCTGCTGTAATGGGAACCCCTCCCCCATTTACTTCTC10.3058103975535168No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.3058103975535168No Hit
CATATTGTATCCATAAAACAAGAATTAGGAAAACTATGATAAAGGAACCAT10.3058103975535168No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGACGGAGAG10.3058103975535168No Hit
ACCTTAGGAAAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTACATTCAA10.3058103975535168No Hit
CAATGGGAAACCCTGTCTCTTATACACAACTGAAGCTGACGACGACGGAGA10.3058103975535168No Hit
CCCCTAGTGCCCCCTTAGTCTGGGGTGGGGGAACCCATGGCCCTCCTGCCC10.3058103975535168No Hit
GACTGGGAAACCCTGTCTCTATACACATCTGACGCTGCCGACGACGGAGAG10.3058103975535168No Hit
GTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCACCCACCTCAGG10.3058103975535168No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGACGGAGAG10.3058103975535168No Hit
CTCACTTCTAGGAATACTAGTATATCGCTCACACCTCATATCCTCCCTACT10.3058103975535168No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.3058103975535168No Hit
GTCCAACCAGTAAGCTACCCCTTTACCATCATTGGACAAGTAGCATCCGTA10.3058103975535168No Hit
GACAGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCACGCCAAGCGGCT10.3058103975535168No Hit
GGGGTGGGGGGGGGGGGGGGGGTGTGGGGGGTGGGGGGGGGGGGGGGGGGG10.3058103975535168No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACACTGCCGACGACGGAGA10.3058103975535168No Hit
CCCTGCTAACTTTTTTTTTTTTATTAAGGGGGGTATTACACGTTTTCCCAG10.3058103975535168No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT10.3058103975535168No Hit
CTGGGCCGGTCATCAGTCTCTTATACACATCTGACGCAGCCGACGACGGAG10.3058103975535168No Hit
GGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG10.3058103975535168No Hit
TTGGGGTTAGGTGGTTGATCTATTGCGTCCCTTGCACACTCTTACTTCGAG10.3058103975535168No Hit
CTGGGCCCGTAAACTGTCTCTTATACAAAAATGACGCAGCCGACGACGGAT10.3058103975535168No Hit
GACCAACCCTGTGGGGTGCCAGATGGTGGCTTGGAGTTGTTGTTAGTTACC10.3058103975535168No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGTGGCT10.3058103975535168No Hit
GCCTTCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCCTGTC10.3058103975535168No Hit
GCTGACCCTGATCAGGGCCGAGTTGTCTCGGCGGCGCTGCCCTGTCTCTTA10.3058103975535168No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGACGTAGAG10.3058103975535168No Hit
GTAAATATGACGGGGGTGGGAGGCAGCCCTGTAAACCCTGTCTCTTATACA10.3058103975535168No Hit
GACTGGGAAACCCTGTCTTTATACACATCTGACGGCTGCCGACGACGGAGA10.3058103975535168No Hit
AGTAAATAACAGGGTAATATTGTAGTATAAGAAATATATATTTAGGCTGGG10.3058103975535168No Hit
GTGTGTGATCCACCAAACTAGTTTAATAACAAGATTTTTATCTGGAAAGAC10.3058103975535168No Hit
GAAGGCTGGGACGGCTCAAGTACCAGGCACCTGACATCGACGTGCAGCTGA10.3058103975535168No Hit
AATACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGCTGTCTC10.3058103975535168No Hit
GTTTATCAGATGAGGATGAGAGATGTGTGCACAGCTGGCAGGAGCACTGGC10.3058103975535168No Hit
GACTGTGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.3058103975535168No Hit
GACTGGCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTG10.3058103975535168No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)