FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences369
Sequences flagged as poor quality0
Sequence length51
%GC75

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15241.19241192411924No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA8322.493224932249323No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT369.75609756097561No Hit
GACTGGCACGCTCCATGACTCTGCGTTGATACCACTGCTTCGTCAGTATAG338.94308943089431Clontech Universal Primer Mix Long (95% over 23bp)
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT154.0650406504065035No Hit
GACTGGCACGCGGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCG30.8130081300813009No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGACGGAGAG20.5420054200542005No Hit
TCTCCTTGGGTGGGTGCTGCCCTTCCAGAAGCAGTGGTTGGAACCAGGGAA20.5420054200542005No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.27100271002710025No Hit
GAATGCTAAACCAAGTCTAAAAAAAACATCAGACGCATCCTACTAAACATA10.27100271002710025No Hit
CCATATGATCTAGCAATATAAAAGAAGGAAGTCCTGCCATTTGCAGCAACG10.27100271002710025No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGACGGAGAG10.27100271002710025No Hit
CTCCAACCCTCAACTGGGACATAAAAAAATAATAAAATACCGACGACCGAG10.27100271002710025No Hit
GGCTGGGTAAACCAGTCTAATAAACAAAACATAAGCACCACACGACGGAGA10.27100271002710025No Hit
CTCCAACCCTCATCTGTCTATTATACACAAAATAATAATAAAAAAAAATAC10.27100271002710025No Hit
CTCCAACCCTCATCTGTCTCTTATACACAACATAATAATAAAAAAACCGAT10.27100271002710025No Hit
CACTGGTAAACCATGTCTCTTATACACATCTGACGCTTCCTACGACGGAGA10.27100271002710025No Hit
CCCTCCCTTACCATCAAATCAATTGGCCACCAATGGTACTGAACCTACGAG10.27100271002710025No Hit
GACTGGCACGATCCATGACTCTGCGTAGATACCACTGATTCGTCAGTATAG10.27100271002710025No Hit
GAATGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.27100271002710025No Hit
CTCCAACCCTCATCAGTCTATTATAAAAAACATACCATAACAAAAAAAAAA10.27100271002710025No Hit
GCAGCTTGGGAACTGAAGGGGAAGAGACTTTTTCTCTAGGTTCTATGGCCT10.27100271002710025No Hit
GACTGGGAAATCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.27100271002710025No Hit
CTCCAACCCTCATCTGTCTCTTATAAACATCATAATATTACTACAAACAAG10.27100271002710025No Hit
GACTGGCACGCTCCATGACTCTGCGTTGATACCACTGATTCGTCAGTATAG10.27100271002710025Clontech Universal Primer Mix Long (95% over 23bp)
AGTAGAGACGGGGTTTCACCGTGTTAGCCAAGAGGACCCAAGGAGCCCAGA10.27100271002710025No Hit
GAATAGTAAACAAAGTCACATAAACACATATAACTCTACCAACTACATAAA10.27100271002710025No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGG10.27100271002710025No Hit
GACTGGGAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.27100271002710025No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.27100271002710025No Hit
GGGGGGTGGGGGGGGGTGTGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG10.27100271002710025No Hit
CTCCAACCCTCATCTGTCTCTTATACACAACAGACTAATACAACAACACAC10.27100271002710025No Hit
CTCCAACCCTCATCTGTCAATTATACACAAAATACCAAAAAAAAAACAAAT10.27100271002710025No Hit
GATTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.27100271002710025No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGG10.27100271002710025No Hit
GAGAATGGGTAGGCCTTTGTAAAATTGACAGAGAGGGGAAACCCCGTAAAG10.27100271002710025No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGG10.27100271002710025No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGG10.27100271002710025No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.27100271002710025No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGCGCTGCCGACGACGGAGAG10.27100271002710025No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT10.27100271002710025No Hit
GACTGGCACGCTCCATGACTCTGCGTAGATACCACTGCTTCGTCAGTATAG10.27100271002710025Clontech Universal Primer Mix Long (95% over 23bp)
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.27100271002710025No Hit
CACTGGCACGCTCCATGACTCTGCGTTGATACCACTGCGTCGTCAGTATAT10.27100271002710025Clontech Universal Primer Mix Long (95% over 23bp)
GAATGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.27100271002710025No Hit
CAATCGTAAAACATTTAAATTAAAAAAATCTTAATAACCATACTAAGTATA10.27100271002710025No Hit
CTACAACCCTCACCTGTGAAATAAAAACATAATAAGATACCGAAGACCGAG10.27100271002710025No Hit
GACTGGGAAACCCTGTCTCTTATATAATCTGACGCTGCCGACGACGGAGAG10.27100271002710025No Hit
GACTGGGAAACCCTGTCTCTTATCACATCTGACGCTGCCGACGACGGAGAG10.27100271002710025No Hit
GCTATGTGGGCGGCCTGTGGCTCTCACGCCATCTGTACCATCCTGCTTCCA10.27100271002710025No Hit
CACTGGTAACCCCTGTCGAATATACACAACTTACTCAGCCCACGACGTAGA10.27100271002710025No Hit

[FAIL]Adapter Content

Adapter graph