FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA19639.516129032258064No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT13928.024193548387093No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG244.838709677419355No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGTAG183.6290322580645165No Hit
GGTTTCCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT51.0080645161290323No Hit
GGTTTCCCAGTCCCGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTC40.8064516129032258No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGACT30.6048387096774194No Hit
ATGACCGGCCCAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAG30.6048387096774194No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACGTAGA30.6048387096774194No Hit
GGTTTCCCCGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA30.6048387096774194No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACGTAGAGGAAT30.6048387096774194No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAG30.6048387096774194No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACGTAGAG20.4032258064516129No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATATCCGAGCCCACGAGACGTAGA20.4032258064516129No Hit
GGTTTCACAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA20.4032258064516129No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGACCACGAGACGTAGA20.4032258064516129No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAGCCCACGAGACGTAGAG20.4032258064516129No Hit
GGTTTCCCAGTCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA20.4032258064516129No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGAGACGTAGA20.4032258064516129No Hit
GGGTGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGGAA20.4032258064516129No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAATC20.4032258064516129No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGTAG20.4032258064516129No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA20.4032258064516129No Hit
GGTTGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGGAA20.4032258064516129No Hit
GGGTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA20.4032258064516129No Hit
ATGACCTGCCCAGCAGTCTCTTATACACATCTACGAGACCACGAGAAGAAT10.20161290322580644No Hit
ATGAATGAATTTGAGACGGAAGGCTTCTTTGCTTTGCATCAGCGCCGGGGT10.20161290322580644No Hit
GGTGTGGGGGAGGAGCACAAAACTCCAGCCCACTGAACCTCTGCCAATTAA10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACTTAGAGGAAT10.20161290322580644No Hit
GGGTTCCCAGTCCACTATACACATCAACTAGCACACGAGACGTAGAGGAAT10.20161290322580644No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACGTAGAGGAATC10.20161290322580644No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGATACGTAG10.20161290322580644No Hit
GTTATATGTCAGGAGCCATGCAACCTACTGGAGATACATTTGTGGGTGAGA10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACGTAGAG10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCAGAGCCCACGAGACGAAGAGGAAT10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACAAGACGTAAA10.20161290322580644No Hit
GGTTTCCAGTCCATATACACATCTCCGAGCCCACGAGACGTAGAGGAATCT10.20161290322580644No Hit
GGGTGGGGTGGCTTGGAACACTGTCACCTCGCTGATTATCCCCAGACTGGC10.20161290322580644No Hit
CCTATTTAATAGGGCCTCTGTTGCTTATTGTTTTCCTATCATTCTTTTTAT10.20161290322580644No Hit
GGTTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAGA10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTATAGGAAT10.20161290322580644No Hit
GGTTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAG10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGAATC10.20161290322580644No Hit
TTGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGATACGTAG10.20161290322580644No Hit
TTGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGTAG10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACAATCTCCGAGCCCACGAGACGTAGAG10.20161290322580644No Hit
GGTTTCCCAGTCCTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGG10.20161290322580644No Hit
CCACAGAAAGATGCGAAATTGCTACTAGGATAAATACAGCAAAGGACAGTT10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACAAATCTCCGAGCCCACGAGACGTAGAGGAAT10.20161290322580644No Hit
AGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGAGACGTAGAG10.20161290322580644No Hit
GGTTTCCCAGTCCCGAACCAGTCGGCTGTCGGCGGACTGCTCGAGCTGCTC10.20161290322580644No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAA10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACAACTCCGAGCCCACGAGACGTAGAGGAAT10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACGGAGAG10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAG10.20161290322580644No Hit
GGTTTCCCATTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACGTAGAGGAATCG10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACGTAGA10.20161290322580644No Hit
GTCTTCCTAGAGGTTTCTGGCCAGTTTGATGTTGAGTTCCGGCTTGCCGCG10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTCGA10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTAAACACATATCCGAGCCCACTAGACGTAGA10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTACGAGCCCACGAGACGTAGA10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCGAGCCCACGAGACGTAGAGGAATC10.20161290322580644No Hit
GGCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCGCG10.20161290322580644No Hit
GGTTTCGCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGAGGAAT10.20161290322580644No Hit
GGTTGGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGGAA10.20161290322580644No Hit
GTGACCTTCCAAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGTAG10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCCTTATACACATCTCCGAGCCCACGAGACGTAGAG10.20161290322580644No Hit
GTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACGTAGAGG10.20161290322580644No Hit
GGTTTCCCAGGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACGTAGAGGACT10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACGTAGAG10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCTAGCCCACGAGACGTAGA10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGTAGATGAAT10.20161290322580644No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGAAGTAGA10.20161290322580644No Hit
CCCCAGGTCCAGGGGTCTTGGTCCTATTTCCTCCTGTGGCCCGGAGTTTGA10.20161290322580644No Hit
GTTTTCAGTTGGTTTTCTTCATATCTGCCCTCTCCTCCCCCAAAATCTAGG10.20161290322580644No Hit
GGTTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGA10.20161290322580644No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.20161290322580644No Hit
GGTTTCCCAGTCCACTATAATAAACACATCACCGACCCAACTATAAAAAAA10.20161290322580644No Hit
GGATTCCCAGTCCACTATACACATCTCAGAGCCCACGAGACGTATATGAAT10.20161290322580644No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCATCATGAGCCGCTTGGCGAGG10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGAAGTAGAGGAAT10.20161290322580644No Hit
CATGGTCTAATCAACTCTTAAAGGTCTCGCTTCGTAATACCATCACACTGG10.20161290322580644No Hit
CCGCAGTCGTCAGCCTCCCTGACGTCTGCCACCAGCGCCCCCACTCCTCCT10.20161290322580644No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCCACGAGACGTAGAGGAA10.20161290322580644No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)