FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496
Sequences flagged as poor quality0
Sequence length51
%GC71

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA21743.75No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG16934.07258064516129No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT265.241935483870968No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG153.024193548387097No Hit
GACTGGGAAACCCTGTCTCTTATACAATCTGACGCTGCCGACGACGGAGAG40.8064516129032258No Hit
GTCCAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGT40.8064516129032258No Hit
GACTGGCACGCGGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCG30.6048387096774194No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG30.6048387096774194No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.4032258064516129No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGATA20.4032258064516129No Hit
GACTGTGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.4032258064516129No Hit
GACTGGAAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.4032258064516129No Hit
GACCAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGT10.20161290322580644No Hit
GAGGAGTGGGGGCGCTGGTGGCAGACGTCAGGGAGGCTGACGACTGCGGCT10.20161290322580644No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAACTGACGCTGCCGACGACGGAG10.20161290322580644No Hit
CTTGGCCGGTAAACTGTCTCATATACACAACTGACGCTGCCGACGACGGAG10.20161290322580644No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.20161290322580644No Hit
GGGGGGGGGGGGGCATGGGCGGGGCGGGCGTGGGGGGCGGGGCGGGGGGGG10.20161290322580644No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATGGAGA10.20161290322580644No Hit
GGAAACCCTGTCTCTTATAAACAACTGACGCAGCCCACGACCGAGAGAGTG10.20161290322580644No Hit
TCTATGACAGAGGCTTGATCTTGTCTCACCCACAAATGTATCTCCAGTAGG10.20161290322580644No Hit
CCCACAGTTCAGGGGTTGAAGTGTAATAGCCAGTGTGATGGTATTACGAAG10.20161290322580644No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGCG10.20161290322580644No Hit
CCAGTCTGGGGATAATCAGCTAGGTGACAGTGTTCCAAGCCACCCCACCCC10.20161290322580644No Hit
CCTGAGTAGCTGGGATTGCAGCCTTAAAGCCCACTCTCATCTTGCAAGCCT10.20161290322580644No Hit
GGAAACCCTGTCGCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTG10.20161290322580644No Hit
GGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG10.20161290322580644No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATATGACGCTGCCGACGACGGAG10.20161290322580644No Hit
GCAAGGAGCTGGGTATCACCGCCCTACACATCAAACTCCGGGCCACAGGAG10.20161290322580644No Hit
CTGGGCCCGTCATATGTCTCTTATAAACAACTGACGCTGCCGACGACGGAG10.20161290322580644No Hit
GACTGGGAAACCCTGTCTCTTATATACATCTGACGCTGCCGACGACGGAGA10.20161290322580644No Hit
GGAAACCCAGTCTCTTATACACAACTGACGCTGCCGACGACGGAGAGAGTG10.20161290322580644No Hit
GACTGGCAAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.20161290322580644No Hit
GGCTGGGAAACCCAGTCTCTTATAAACAACATACCCAGCCCACCACCGAGA10.20161290322580644No Hit
CTGGGCCCGTCATCTGTCTCATTATACACAAAAGACGCAGCCCACGACGGA10.20161290322580644No Hit
GACAGGCACCCACCAATACCCGCCCAGCACTAGCTGCCGCGCCAACCCGCT10.20161290322580644No Hit
CTTGGCCCGTAAAATTTCACTTATACACATAAGACGCATCCGACCACGCAG10.20161290322580644No Hit
GACTGGCACGCTGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCG10.20161290322580644No Hit
GACTGGGAAACCCTGTCTCTTACACACATCTGACGCTGCCGACGACGGAGA10.20161290322580644No Hit
CTGGGCCGGTCATCAGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.20161290322580644No Hit
GCTATAGCACACTTCTTCTATGTATGCAAGTTTCCCTGCTACTTCCTGGCT10.20161290322580644No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGTCAGTAT10.20161290322580644No Hit
GCTGTGGGAAGAAGGTGGCAGTGAACTCGTGGCACTTGACGTGGTGGACCT10.20161290322580644No Hit
CTTGGAAGGCCATCTCTATAAAAATGATTTTCCCAGGACAGTAACCAGATG10.20161290322580644No Hit
GCTCTGCAAAAGAATGTGATTTGTGACAAATGTGATGGAACGGTGTTTTTT10.20161290322580644No Hit
GACTGGGAAACTCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.20161290322580644No Hit
CACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.20161290322580644No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGAAGCTGCCGACGACGGAG10.20161290322580644No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTGAGA10.20161290322580644No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCAGACGCTGCCGACGACGGAG10.20161290322580644No Hit
GTCTTTGCTCTGTATCTCATTTCTTACTCTCTTTCTAAGGATGAAGAAGAA10.20161290322580644No Hit
GGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTT10.20161290322580644No Hit
CTTGGCCGGTCACCTGTCTCTTATAAACATATGACGCTGCCGACGACGGAG10.20161290322580644No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAACTGACGCAGCCGACGACGGAG10.20161290322580644No Hit
GACTGGGAAACCCTGTCTCTTATACACATTTGACGCTGCCGACGACGGAGA10.20161290322580644No Hit
GACTGGCACGCGGCGACCCGCTCTCGCCGGGGGAGCAGCTCGAGCAGTCCG10.20161290322580644No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.20161290322580644No Hit
GGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTG10.20161290322580644No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAAATGACGCTGCCGACGACGGAG10.20161290322580644No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)