FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences748
Sequences flagged as poor quality0
Sequence length51
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA45160.29411764705882No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13017.379679144385026No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT314.144385026737968No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG162.13903743315508No Hit
GTCCAACCCTGTGATGATTGATGCCACTGCTTCCCATGTACTCTGCGTTGA81.06951871657754No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT70.9358288770053476No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA50.6684491978609626No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG50.6684491978609626No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGACGGAGAG30.4010695187165776No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGATA30.4010695187165776No Hit
GAATGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA30.4010695187165776No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGACGGAGAG20.267379679144385No Hit
GACTGGGAAACCCTGTCTCTTATACACACTGACGCTGCCGACGACGGAGAG20.267379679144385No Hit
GACTGGGAAACCCTGTCTCTTATACACATTGACGCTGCCGACGACGGAGAG20.267379679144385No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.267379679144385No Hit
GACTGGGAAACCCTGTCTCTTATACACACCTGACGCTGCCGACGACGGAGA20.267379679144385No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.267379679144385No Hit
GACTGGGAAACACTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.1336898395721925No Hit
GACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGG10.1336898395721925No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAACTGACGCTGCCGACGACGGAG10.1336898395721925No Hit
GACTGGCACGCAGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGACGGAGAG10.1336898395721925No Hit
CTCCGACTCAAATCATACTCAAAAAAAAAAAAAAAAAAACCCACCACGGAG10.1336898395721925No Hit
CTCCGACTCTAATCAGACTCAAATAAAAAAAAAAAAAAGCCGACCACGGAG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGATGACGGAGA10.1336898395721925No Hit
CTCCGACTCTCATCATTCTCTTATAAAAAAAATAAACATCCCACCACTGAG10.1336898395721925No Hit
CTGGGCCGGTCATCAGTCTCTTATACACATATGACGCTGCCGACGACCGAG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGAAGACGGAGA10.1336898395721925No Hit
GACCAACCCTGTGATGATTGATGCCACTGCTTCCCATGTACTCTGCGTTGA10.1336898395721925No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.1336898395721925No Hit
CACCAACCCTCAAACGTCTCATAAAAAAAAAATAAAAAACACACCACGGAG10.1336898395721925No Hit
NACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACCATCTGACGCTGCCGACGACGGAGAG10.1336898395721925No Hit
ATACTCTAGCTGGTACTGCTGCGCTCCACACGGTGATTATGACTGTCTCTT10.1336898395721925No Hit
CTCCAACCCTCATATGTAAAATATACAAAACTGAAGCTTCAAACAACCTAC10.1336898395721925No Hit
GACTGGGAAACCCTTTCTCTTATACACATCTGACTCTGCCGACGACGGAGA10.1336898395721925No Hit
CCGGAGTAGCTGCTGGGACTGCAGGAACGTGCCACCATGCCTGGCTCAAAC10.1336898395721925No Hit
CTGGGCACCAAATATGTATCTTAAAAAAAAAAGAATCTGCCTACAACTAAT10.1336898395721925No Hit
GGGGGGGGGGGTGGGGGGCAGGTGGACGCAAAAAAGAAATCAGAAAAAGAG10.1336898395721925No Hit
CTCCAACCCTCAAACGTCTCATAAAAAAATATTAAAAAACACAACACGGAC10.1336898395721925No Hit
CTCCAACCCTCAAACGTCTCATAAAAAAATATTAAACAACCCACCACGGAC10.1336898395721925No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTTACGCTGCCGACGACGGAG10.1336898395721925No Hit
GTCCAACCCTGTGATGATTGCTGGGCCGGTCATCTGTCTCTTATACACATC10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACAATCTGACGCTGCCGACGACGGAGAG10.1336898395721925No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCCACCACGGAG10.1336898395721925No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGATGCCGACGACGGAGA10.1336898395721925No Hit
GGGGGGTGTGGCTTTGTGGCGAACGCCGGGCGTCCCGTCGTCGTTCTAAGG10.1336898395721925No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.1336898395721925No Hit
GACTGGCACGCTCCATGACTGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.1336898395721925No Hit
GGTATTTCCCAGAATTCTATTATTTTCTCCATCCCTGGATGATTTTACCCT10.1336898395721925No Hit
GACTGGCAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.1336898395721925No Hit
TGGGGGTGGGTGTCGGGGGGGGGGTGGGGGTCTGGGGGGGTGTGGGGGGGG10.1336898395721925No Hit
GGGGGGGCGGTGCGGGGGTGTCTCGGTCGCGGGGGTTGGTTGTGGGTGGGG10.1336898395721925No Hit
CTCCACCCTACATCTGTCACATAAAAACAAAATACACATCCCACGACGGAG10.1336898395721925No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTGAGA10.1336898395721925No Hit
CTCCAACCCTCATATCTCTATTTAACACATAATACTAAAACAAACACCTAG10.1336898395721925No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG10.1336898395721925No Hit
CTCCAACCCTCATATCTCTATTAAACACATAATACTAAAACAAACACCTAG10.1336898395721925No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.1336898395721925No Hit
CTCCAACCCTCAAAAGTCTCATAAAAAAATATTAAAAAACAAACCACCGAG10.1336898395721925No Hit
CTCCAACCCTCATATGAATCATATACACATCTCACACATCATAATAAGAAA10.1336898395721925No Hit
CTCCAACCCTCATACTACTCTTATACACAAATTAAAAAACCCACAACCGAG10.1336898395721925No Hit
CTGTGCACCTCAACAAACTATAAAACAAAAAACAAGCACACGACCAAATAA10.1336898395721925No Hit
CTCCAACCCTCAAACGTCTCTTAAACACAAATTAAAAAAAACAACAAGGAC10.1336898395721925No Hit
GACTGGGAAACCCTGTCTATTATACACATCTGACGCTGCCGACGACGGAGA10.1336898395721925No Hit
CTGGGCCGGTCAACTGTCTCTTATACACATCATACCCAGCCGACGACGGAG10.1336898395721925No Hit
CTCGGCCGGTAAAAAATCTATTAAAAACAAATTACCCAGCCCACCACGGAT10.1336898395721925No Hit
GACTGGTAAACCCAGTAACATAAACACAACTGACTCATCCGACTAATTATA10.1336898395721925No Hit
GACTGGCACGCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGA10.1336898395721925No Hit
GACTGGGAATCCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.1336898395721925No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGAAGCTGCCGACGACGGAG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTGAGA10.1336898395721925No Hit
GTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.1336898395721925No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCAGACGCTGCCGACGACGGAG10.1336898395721925No Hit
GACTGGCACGCTCCATGACCGGCCAGCAGTCTCTGCCTCGCCAAGCAGCTC10.1336898395721925No Hit
GACTGGCTGTCTCTTATACACATCTGACACTGCCGACGACGGAGAGAGTGT10.1336898395721925No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.1336898395721925No Hit
CTGGGCCCGTCAACATTCTAATAAAAACAACTGACGCAGACGACCACCGAG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATAAACATCTGACGCTGCCGACGACGGAGA10.1336898395721925No Hit
CTCCGACCCTAATCAGACACAAAAAAAAAAAAAAAAAAAACCACCACGGAG10.1336898395721925No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG10.1336898395721925No Hit
ATCGGGTCCACTACAAGGTTTTCCAACTTCGCTTCTACACCCTAAGCTAAT10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTAACACATTGACGCTGCCGACGACGGAGAGA10.1336898395721925No Hit
CTGGGCCGGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGA10.1336898395721925No Hit
CTCCAACCCTCATATCTCTATTAAACACATAATAATATAACAAACAACTAG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACACATTTGACGCTGCCGACGACGGAGA10.1336898395721925No Hit
CGGGGCCGGTCATCTGTCTCTTATACACATCTGACGCAGCCGACGACGGAG10.1336898395721925No Hit
GACTGGGAAACCCTGTCTCTTATACACCATCTGACGCTGCCGACGACGGAG10.1336898395721925No Hit
GACTGGGAAACCCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.1336898395721925No Hit
CAGGGCCCGTCAACAGTAACTTATACAAAACTGACGCAGCCGACCACCGAG10.1336898395721925No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)