FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26513
Sequences flagged as poor quality0
Sequence length51
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1381252.09519858182779No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT999037.67962886131332No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1500.5657601931128126No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA1380.5204993776637876No Hit
GACTGGCACGCTCCATGATCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT930.3507713197299438No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCAGCT550.20744540414136461No Hit
GACTGGCACGCTCCATGGCCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT470.17727152717534794No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT410.15464111945083545No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT390.14709765020933127No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT340.12823897710557086No Hit
GACTGGCACGCTCCATGGCCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT290.10938030400181042No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT280.10560856938105834No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT270.10183683476030626No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)