FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT27764.87119437939111No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTAT4610.772833723653395No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG255.85480093676815No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG81.873536299765808No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTC51.1709601873536302No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC30.702576112412178No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACGGACTC30.702576112412178No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACGGACTC20.468384074941452No Hit
GGTTTCCCAGTCCTGTCTCTTATACCATCTCCGAGCCCACGAGACGGACTC20.468384074941452No Hit
TGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT20.468384074941452No Hit
GGTTTCCCAGTCCTGTATCTTATACACATCTCCGAGCCCACGAGACGGACT20.468384074941452No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCCGAGACGGACTC20.468384074941452No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACT20.468384074941452No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACGGACT20.468384074941452No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTATC20.468384074941452No Hit
GGTTTCCCCGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.234192037470726No Hit
GGTATCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.234192037470726No Hit
GGTAACCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACT10.234192037470726No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGATTGGCGAGG10.234192037470726No Hit
GGGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC10.234192037470726No Hit
GTCGGCTTACGGCGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGC10.234192037470726No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACGGACTCCTATC10.234192037470726No Hit
CTTATAAAACCATCAGATCTTGTGAGAACTCACTCACTATCATGAGAAAAC10.234192037470726No Hit
GGGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACTCCTA10.234192037470726No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGACACCTAT10.234192037470726No Hit
GTATTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.234192037470726No Hit
GGTTTCCCAGTCCATTATACACATCTCCGAGCCCACGAGACGGACTCCTAT10.234192037470726No Hit
GGTTTCCCAGTCCACTATACTGCCAGTCCTGTCTCTTATACACATCTCCGA10.234192037470726No Hit
GGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCCCAAACATATAACT10.234192037470726No Hit
CTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAAC10.234192037470726No Hit
GNTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.234192037470726No Hit
TCCAAGGTAGCATCTTTGTGACACTGTCTAAGGAAGAATTTTTAAAGTGCA10.234192037470726No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTC10.234192037470726No Hit
ATGACCGGCCCAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC10.234192037470726No Hit
AAGCCACAGCCCCGTTTTATTTACACTCATCCCAAAGCACATGATGGGGCT10.234192037470726No Hit
CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTA10.234192037470726No Hit
GGTTACCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACT10.234192037470726No Hit
CAATGTTCTCAGGGCCCCCTGCCTGTGCCCATGCCCTGATGTTCTCCTGTC10.234192037470726No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC10.234192037470726No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.234192037470726No Hit
GGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTCCTA10.234192037470726No Hit
GGGGTCCCAGGCCTGTCTCTTATACACATCTCCGAGCCCACGAGTCGGACT10.234192037470726No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACGGACTC10.234192037470726No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGAGAGG10.234192037470726No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACGGACT10.234192037470726No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGATTTGCGAGG10.234192037470726No Hit
GTATTCTGTTTGGTTTGGTCTTTTTTCAGATAAGTTCAACAGTGGGGTGTC10.234192037470726No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCAACGATACTGACT10.234192037470726No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCCGAGCCCACGAGACGGACT10.234192037470726No Hit
GGTTTCCCAGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACTC10.234192037470726No Hit
GGTTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC10.234192037470726No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCGTGGCGAGG10.234192037470726No Hit
GGTTTCCCATACCACAATACACATATAAGAGCACACGAGACGGACTAATAT10.234192037470726No Hit
GGTTTCCCAGTCCTGTCTCTTATAAATCTCCGAGCCCACGAGACGGACTCC10.234192037470726No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCACGAGACGGACT10.234192037470726No Hit
GGTTTCCCAGTCCACAATACTTACGTCTCCAACATGAGCAGCTTGGCGAGG10.234192037470726No Hit
GGTTTCCCAGTCCTGTCTCTTATAACATCTCCGAGCCCACGAGACGGACTC10.234192037470726No Hit
AGGAAGAGAGCCAAGAAGTTCATCCGGCACCAGTCAGACCGATATGTCAAA10.234192037470726No Hit
GGTTTCCCAGTCCTGTCTCTTTACACATCTCCGAGCCCACGAGACGGACTC10.234192037470726No Hit

[FAIL]Adapter Content

Adapter graph