FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences276
Sequences flagged as poor quality0
Sequence length51
%GC73

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9534.42028985507246No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA7828.26086956521739No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT227.971014492753622No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG124.3478260869565215No Hit
GACTGGCACAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGTCA93.260869565217391No Hit
ATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT51.8115942028985508No Hit
GTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT51.8115942028985508No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT51.8115942028985508No Hit
GACTGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGTCA41.4492753623188406No Hit
GACTGGCACGGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGTCA31.0869565217391304No Hit
TACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.7246376811594203No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAACTGACGCTGCCGACGACGGAG20.7246376811594203No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.7246376811594203No Hit
GGTGTGGCGTGGCTGGTTGGGAGTCCTAGTGTCAAGGCAATTCGTGCCTGT10.36231884057971014No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.36231884057971014No Hit
GACTGGGAACCCCTGTCTCTTAACACATCTGACGCTGCCGACGACGGAGAG10.36231884057971014No Hit
GACTGGCACGCTGCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.36231884057971014No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCAGCCGACGACGGAG10.36231884057971014No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGTGGTTGGGGGGGGG10.36231884057971014No Hit
AACTGCGAAAAAAAGTATATTATACACATATGAAGATGCCGAATACCAAGA10.36231884057971014No Hit
CTGGGCCGGTCATCAGTCACTTATACACATCAGACCCAGCCGACCACGGAG10.36231884057971014No Hit
AACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGATA10.36231884057971014No Hit
GGCAGGGAAAACCAGTCACATATAAAAAAAAAACCCAGCCCACCACCGAGA10.36231884057971014No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTTGCCAAGCGGCT10.36231884057971014No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGG10.36231884057971014No Hit
AATAGCAGGAAGGTATTGCAGCAAGATGGATTTGGGAAAGGACCAATCTCA10.36231884057971014No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCAGACGCTGCCGACGACGGAG10.36231884057971014No Hit
CCTTCTTGGAAGCCTCATCCACATATTTCTGGTAATAGGCCACCAGGGCTT10.36231884057971014No Hit
GACTGGGAAAGCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.36231884057971014No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT10.36231884057971014No Hit
GGGGGGGGGGGGGGGGGGTGGGGTGGTGGGGGTGGGGGTGGGGGGGGGGGG10.36231884057971014No Hit
CGTGTAGGTCCGTGAGCATCTGTGTCAGAGGCTGATATTTACTCTGTCTCT10.36231884057971014No Hit
CTGGGCCGGTCATCAGTCTCTTATACACAACTGACGCTGCCGACGACGGAG10.36231884057971014No Hit
GGCTGGGTCTAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAAGCGGAG10.36231884057971014No Hit
GCTGATCTGAACACAGGACAAGCCACATTCTTCAACACTAGCTGAATCAGA10.36231884057971014No Hit
GACTGGGAAACCCTGTCACTTATACACATCTGACGCTGCCGACGACGGAGA10.36231884057971014No Hit
GACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.36231884057971014No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGGGGCT10.36231884057971014No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCAGCCGACGACGGAGA10.36231884057971014No Hit
TTCTCTCGCTGGGTCCACTTGATGTATTTAGGACAAGTAGCCTTGTCCTGG10.36231884057971014No Hit
CGGGGCCGGTCATCTGTCTCTTATACACAACTGACGCTGCCGACGACGGAG10.36231884057971014No Hit
CCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACG10.36231884057971014No Hit
GACTGTGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.36231884057971014No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACCTGCCGACGACGGAGAG10.36231884057971014No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTGGTGGGGGGGGGCGGG10.36231884057971014No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)