FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences385
Sequences flagged as poor quality0
Sequence length51
%GC79

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19450.38961038961038No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10828.05194805194805No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT194.935064935064935No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA30.7792207792207793No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT30.7792207792207793No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.7792207792207793No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGACGGAGAG20.5194805194805194No Hit
GACTGGGAAACCCTGTCTCTTATACACATCCTGACGCTGCCGACGACGGAG20.5194805194805194No Hit
GACTGGGAAACCCTGTCTCTTATACACATTGACGCTGCCGACGACGGAGAG20.5194805194805194No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGAGCTGCCGACGACGGAGAG20.5194805194805194No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG20.5194805194805194No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGG20.5194805194805194No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG20.5194805194805194No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA20.5194805194805194No Hit
TGGCGCGGGTGGTGCAGCATGTTACCAATCGGTGTGGGGCGTATACAGGTG10.2597402597402597No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.2597402597402597No Hit
AGGATGTCCAAACGCCCTACACCTCCAAACTCACAACCCTACCCCCCACCC10.2597402597402597No Hit
CTCCAACCCTCAAAAGTGTATAAAACAAATATTAAAAATAAAACCACGGAG10.2597402597402597No Hit
NACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.2597402597402597No Hit
GACTGGCCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGT10.2597402597402597No Hit
ACACTTTGGGAGGCCAAGGCCGGCAGATCACTGAGATCAGGCGTTCGAGAC10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGACA10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCCGACGCTGCCGACGACGGAGA10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTTACGCTGCCGACGACGGAGA10.2597402597402597No Hit
CCCTTATGGACTTTGGTGGCTTGCTAACTGACATGGGACAGGGTCTGGGAT10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGT10.2597402597402597No Hit
CTCCAACCCTCAAAAGTCTCATAAAAAAATATTAAAAAACACACCACGGAG10.2597402597402597No Hit
GTGTTTTAGCAGCCTTTCATGCTCTCTGAGAAGGTTTTCCCTTTCCTCCTC10.2597402597402597No Hit
GACTGGGAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.2597402597402597No Hit
TATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACG10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCGACGCTGCCGACGACGGAGAG10.2597402597402597No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG10.2597402597402597No Hit
CCTATAGCTTGAAGGATGCTCAGAAAGGAAAAGGAGTTGGTAGGATGAAAA10.2597402597402597No Hit
CTCCAACCCTCAAAAGTCTCTTAAAAAAAAATTAAAAAAAAAACCACCGAG10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCCGCCGACGACGGAGA10.2597402597402597No Hit
GCTTCATATTACGAAGACTATAAGCATAGGAAAATAGAAAATGAGATCTGT10.2597402597402597No Hit
GACTGGCACGCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTGT10.2597402597402597No Hit
GACTGGCACTGACTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGT10.2597402597402597No Hit
GACTGGGAAACCCTGTCTATTATACACATCTGACGCTGCCGACGACGGAGA10.2597402597402597No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.2597402597402597No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGG10.2597402597402597No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAAAATACGCTGCCGACGACGGAG10.2597402597402597No Hit
GTTTTTCTCCAGGAATCTCTGGAACCCCCATAGCTGCTGCAAACTGCGCTG10.2597402597402597No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.2597402597402597No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT10.2597402597402597No Hit
GTCAGGGCTAAGGTTTGAGAATGTCAGAATGCCGTTGTCCTGGGTCAAGAG10.2597402597402597No Hit
GTAGTAAGGGTGGAAGGTGATTTTATCGGAATGGGAGGTGATTCCTAGGGG10.2597402597402597No Hit
GACAGGGAAACCCTGTCTCTTATACACAACTGACGCTGCCCACGACGGAGA10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTTCCGACGACGGAGA10.2597402597402597No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGTAGA10.2597402597402597No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAT10.2597402597402597No Hit
CTGGGCCCGTCATCTGTCTCTTATAAAAAAATTACTCTTCCGACGACGGAG10.2597402597402597No Hit
GACTGGCACGCTCCATGACCGACCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.2597402597402597No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)