FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences294
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT11639.455782312925166No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG10736.394557823129254No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG237.8231292517006805No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG82.7210884353741496No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG20.6802721088435374No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCAGA20.6802721088435374No Hit
GCTACTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGACG10.3401360544217687No Hit
ATCAGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGG10.3401360544217687No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACCAGAGAGGAT10.3401360544217687No Hit
CCAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGCGGGATCCCCTTGAGG10.3401360544217687No Hit
CTTTAATAGCAAGCGAATGGTAATTACATGGTCGGATGAGGTCCTCACTCT10.3401360544217687No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.3401360544217687No Hit
GCCTGGATGGTCTTGTGTAATGACGTGACCTCCCTCACACTCCTGTCTCTT10.3401360544217687No Hit
ACTCTGTCTCCCAGGCTAGAGTACAGTGGTGCGATCTCGTCTCACTGCAAC10.3401360544217687No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGATACCAGAG10.3401360544217687No Hit
CATCATGAGGAGGTAGGATTAAGGATTAGGCTTCTGGACTCGTGGTTCGTG10.3401360544217687No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACTAGACCAGAGAGGAT10.3401360544217687No Hit
GGTCTTTGGCGATTACCAGTGGAATATGTAATCCTTTTTAAAAATCAGTCA10.3401360544217687No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACCAGAG10.3401360544217687No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG10.3401360544217687No Hit
GGTTTCCCAGTCCCGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTC10.3401360544217687No Hit
GAGTACATGGGAGTGAACGGAGAGCGTAGTGACCATCATGAGCCTCCTCAA10.3401360544217687No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCTCCGAGCCCACGAGACCAGAGA10.3401360544217687No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAT10.3401360544217687No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCATAG10.3401360544217687No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACCAGAGA10.3401360544217687No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGAACAGAGAGGAT10.3401360544217687No Hit
GGTTTCCCAGTACACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.3401360544217687No Hit
GATTACCCACAACTCTCACTTAAACAAATCTCCGAACCCACTACACCACAT10.3401360544217687No Hit
ACATCCAGCAGTGGTCATTCGACAACGAAAGTCATACCGTAGAAAAGATGG10.3401360544217687No Hit
GGATTCCCAGTCCACTATACACATCTCCGAGCCCACGATACCAGAGAGGAT10.3401360544217687No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCGAGAGGAT10.3401360544217687No Hit
CTAATCCAACTACACAATAATGACCTCTACAACAAGATACCCTTCTATACT10.3401360544217687No Hit
ACTGTTAATAGCCATAGGTCAAAAGATGATAATTTAACATTATAAATCAAG10.3401360544217687No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATC10.3401360544217687No Hit
GGTTTCCCAGTCCACTAAACTGACGTCTACAACATGAGCCGCTTGGCGAGG10.3401360544217687No Hit
GGTTTCCCATTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGAT10.3401360544217687No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGATC10.3401360544217687No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAGAG10.3401360544217687No Hit
GTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCAGAGAGGATC10.3401360544217687No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG10.3401360544217687No Hit
CCCAATGGATGATGTTTTATTCCATCGTCAGGGAAGGTATCATTGAATGAA10.3401360544217687No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)