FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215399

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215399
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences294
Sequences flagged as poor quality0
Sequence length51
%GC75

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12241.49659863945578No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10636.054421768707485No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT217.142857142857142No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT93.061224489795918No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGACGGAGAG20.6802721088435374No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.6802721088435374No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.3401360544217687No Hit
GACTGGCACGCAGGCTAGTAGAGTGCAGTAGCACAACTTCAGTTCACTGCA10.3401360544217687No Hit
CTTGTTGAGGAGGCTCATGATGGTCACTACGCTCTCCGTTCACTCCCATGT10.3401360544217687No Hit
GACTGGGAAACCCTGTCTCTTATACACCTCTGACGCTGCCGACGACGGAGA10.3401360544217687No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGTGGGGTTGGGG10.3401360544217687No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3401360544217687No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGACGGAGAG10.3401360544217687No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3401360544217687No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3401360544217687No Hit
ACGCACGTCTATTGGTGTCCGGTGCTCTTCCAGCCGCTGGACCCTACCTCC10.3401360544217687No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTACCTCGCCAAGCGGCT10.3401360544217687No Hit
GACTGGCACGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCGCCGACAGCCG10.3401360544217687No Hit
GACTGGTAAACCCTGTCTCTTATACACATCAGACGCTGCCGACGACGGAGA10.3401360544217687No Hit
CTCAAATGCCAGACTTAAGTATTTCTCAATAAAGACTCTGATGAAATAATT10.3401360544217687No Hit
CAAATTCACACACCATTACCCACCCAACACTATCATCATCTCCAACCTGAT10.3401360544217687No Hit
GACTGGGAAACCCTGTCTCTTATACATATCTGACGCTGCCGACGACGGAGA10.3401360544217687No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.3401360544217687No Hit
GCTAGATGTGTTTCTAATGTGACAACATCACGAACCACGAGTCCAGAAGCC10.3401360544217687No Hit
TAAAACTAAACCCTTTCACTTATACACATCAGACGCTGCATAAGAAGTACA10.3401360544217687No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA10.3401360544217687No Hit
GGGGGGGGGGGGGGGGGGGGGGGCGGACCCACGCCCAGACACCGACCCCCG10.3401360544217687No Hit
CCTTATTATAAGCAATACAATTAGCATATTTTCTCATTTTCCCCTTCTCAG10.3401360544217687No Hit
GCATTATCTTCAAAATAAAGAAACACGCCATCTTTTCTACGGTATGACTTT10.3401360544217687No Hit
GAGTGTGAGGGAGGTCACGTCATTACACAAGACCATCCAGGCCTGTCTCTT10.3401360544217687No Hit
CTGGGCCGGTCATCTGTCTCATATACACATCTGACGCTGCCGACGACGGAG10.3401360544217687No Hit
GACTGGCACGCTCCATAACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3401360544217687No Hit
CCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCAACCCTCAAGGGGATCC10.3401360544217687No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.3401360544217687No Hit
CCTATACTGCACCCTGTCCACCTCTGCTCCCTCCTCCCTCCCCTGAGAGTG10.3401360544217687No Hit
GGGCGCGGGGGGGCGCGTGGGCTGTGTGGGGCCTGGGGGCATCGTTGGTGG10.3401360544217687No Hit
GAACCCAGGAGGTGGAAGTTGCAGTGAGCCGAGATCGCACCACTGTACTCT10.3401360544217687No Hit
CACAACTGTCTGGTCTTATCCAAAGCATACAAAACCCTGTATTCATTCAAT10.3401360544217687No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)