FastQCFastQC Report
Wed 20 Jul 2022
EGAF00006215444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1034954
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG22177921.428875099762887No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG11730.11333837059424863No Hit
GGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGATCTG11460.11072955899489254No Hit
GGGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGATCT11450.11063293634306452No Hit
ACTGAGGCGAGCGGTCAAACCCGATCCTCGATTGGTGCAGCATGATACCAA11020.10647816231446035No Hit
ATCCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCCCT10360.10010106729381209No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)