FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4015
Sequences flagged as poor quality0
Sequence length51
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT347386.50062266500622No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1603.9850560398505603No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG320.797011207970112No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT180.44831880448318806No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT130.32378580323785805No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT80.199252801992528No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT80.199252801992528No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT70.17434620174346202No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCTCCAAGCGGCT70.17434620174346202No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.14943960149439603No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT50.12453300124533001No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTAGCCAAGCGGCT50.12453300124533001No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT50.12453300124533001No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGA50.12453300124533001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)