FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences226
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT8336.72566371681416No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG3917.25663716814159No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCTAA167.079646017699115No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCCTA114.867256637168142No Hit
GCAGGGGAGAGAGGGTGGGAAAGTGCTTGAGGCCACAGGCAATGGCCTTGA20.8849557522123894No Hit
CATGGAAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGA20.8849557522123894No Hit
GGTTAATAGTGGGGGGTAAGGCGAGGTTAGCGAGGCTTGCTAGAAGTCATC20.8849557522123894No Hit
CCTGTAAGGAAGGTTCCCAAGTACCAATCGAAATCTGAATGTTACCAGACT10.4424778761061947No Hit
CAGAGCCACATGTGGAGGAGGATGACGATGATGAGCTGGACAGCAAGCTCA10.4424778761061947No Hit
ACAAGAAAGTTTGCCTATCTGGGGCGCCTGGCTCACGAGGTTGGCTGGAAG10.4424778761061947No Hit
ATGACCGGCCCAGCAATCATCACAGGGTTGGACCTGTCTCTTATACACATC10.4424778761061947No Hit
GCTGTGGTCTCTGAGAGACTGAAGATTCGAGGCTCCCTGGCCAGGGCAGCC10.4424778761061947No Hit
TCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCACG10.4424778761061947No Hit
GAAATCACATGCCTATGTAAGGAAAGTGCTATTCACCCAGTAAACCCAAAA10.4424778761061947No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGATACCCTA10.4424778761061947No Hit
GCTACATAGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGT10.4424778761061947No Hit
CCCATATTTGGAAATTGTCACATTGAGAAGTTAACACAAAAATGGTACTGG10.4424778761061947No Hit
GACAATACCTGGCTTTCAGGAAGGCTGGGATGTACTGTATAGCAGGACTGC10.4424778761061947No Hit
CCCTAATCTCATTCTCACCTGCTTCTACTTCTGCTCTGAGGCCAGCTGAGA10.4424778761061947No Hit
CCCCTAATAATCGGTGCCCCCGATATGGCGTTTCCCCGCATAAACCTGTCT10.4424778761061947No Hit
CCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCA10.4424778761061947No Hit
TCATCAGCAGCATGTAGGAGATGAGGTTGTGCAGAAGTGTGGCCAGCAAGC10.4424778761061947No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGAACA10.4424778761061947No Hit
AATTCAAGGTAAGTTTGAGAGCTTTGTGGAAACCCAGGTAGGAATGTCTAA10.4424778761061947No Hit
GCCATGGGCTGGAGTCCTAGGCACAGCTCTAAGCCTCCTTATTCGAGCCGA10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACACATCCCCGAGCCCACGAGACCCTAAGACAT10.4424778761061947No Hit
GGTTTCCCAGTCCAATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.4424778761061947No Hit
GCTATATACCAAGAAAGACAACACCACACATTTGCAATTCCTGAAAACACT10.4424778761061947No Hit
CATACAGAGACCGGTACAATAGAAGACGAGGGCGGAGTCGCAGTTATAGCA10.4424778761061947No Hit
ACTGGAGCCATCCTTGATGAACTCTGGCAAGGTCTTCGCCTTGGGTTTGGG10.4424778761061947No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCCCTGT10.4424778761061947No Hit
GGGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGCTGT10.4424778761061947No Hit
GGCAGATAGAGGCAACTCCCAGGCCAGTGAGCTTTACTTGCCGTGTAAAAG10.4424778761061947No Hit
GAGCTCGTTGCCATCCAAAAACTTCCTCTGAGAGACACCTTCATCTTCAGC10.4424778761061947No Hit
GGAATCAGTGGGCATGATCTGGTGTCTGGAAAGGTGGCTTCGGGCTGTCTC10.4424778761061947No Hit
AGGGCAGCGGGGGTGGACAGTGTCCCCTGAGGACCCAGGACCAAGCCCTGT10.4424778761061947No Hit
GATGCAAAAGAAGTTAGGAAGGAAAATCAAGCAAATACATCTGTTGTTTGA10.4424778761061947No Hit
CCCTCATAGCGGCAATCCTCTACCTGATCACCTCCATTGTTGTCCTTGTTG10.4424778761061947No Hit
ATGACCGGCCCATCAATCATCACAGGGTTGGACCTGTCTCTTATACACATC10.4424778761061947No Hit
GTCCCCTAGGCTGGAGTGCAGTGGTGCACGGCAGTAATCCCAGCATTCTGG10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGTGAGG10.4424778761061947No Hit
ATGACCGGCCCAGCAGTCATCACAGGGTTGGACCTGTCTCTTATACACATC10.4424778761061947No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTACGAGCCCACGAGACCCTA10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAATACAT10.4424778761061947No Hit
GGTGAGGGGCCATGCAGCGTTATGGCCGGAGATTTGGAGCTGCGTCTCGAT10.4424778761061947No Hit
TCATGGGACCACTGAAGAAAGACCGAATTGCAAAGGAAGAAGGAGCTTAAT10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACACATCTCCGGCCCACGAGACCCTAAGACATC10.4424778761061947No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACCCTAAG10.4424778761061947No Hit
GCCAGAAGACTGATTGGAGGGCCCTATCTTGTGAGTGGGGCATCTGTTGGA10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTAAGACAT10.4424778761061947No Hit
GGTTGGACCTGTCTTTTATACACATCTCCGAGCCCACGAGACCCTAAGACA10.4424778761061947No Hit
CAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCCTGTCTCTT10.4424778761061947No Hit
GGAAAACACAAGCCAAAAGAGGAGGTCTTGGGTCTGGGTGACCCGTACTCA10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACCCTAAGACAT10.4424778761061947No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAGCCCACGAGACCCTAAG10.4424778761061947No Hit
CTTGTCACAGGGTAGAGCCCCATGATAGGGGTCTGAGGTAGATGAAAACAA10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.4424778761061947No Hit
CCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAG10.4424778761061947No Hit
GGTGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAA10.4424778761061947No Hit
CCCGAATGGGTGGATACCGTCAAGCTGGCCAAGCACAAAGAGCTTGCTCCC10.4424778761061947No Hit
CCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGTGAGA10.4424778761061947No Hit
GGTTTCCCAGTCCTGTCTCTTATACACAACTCCGAGCCCACGAGACCCTAA10.4424778761061947No Hit
CCCGACAGGTATGCTCTCACTCGAACCCTTCTCAGAAGATCAAGGTCGGTC10.4424778761061947No Hit
CCAATACCACACCACTATACACATCTACGACCACACCAGACCCAAAGACAT10.4424778761061947No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCATC10.4424778761061947No Hit
GCACGCGCGCTACACTGATGTATTCAACGAGTTTATAGCCTTGGCCGACAG10.4424778761061947No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCTAA10.4424778761061947No Hit
CAGGGGAAATGAGTCACTAAGCATGGCAAACATCTGCTGTCCCTGTCCGAG10.4424778761061947No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACCCTAAGACATCT10.4424778761061947No Hit
GGGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGATCG10.4424778761061947No Hit
CCCAAATGCACCGGCTCATCTTTGTCTACACTCTAATCTGCGCAAACTTTT10.4424778761061947No Hit
GACTGGCACGCTCCGAGCCCACGAGACCCTAAGACATCGCGTATGCCGTCT10.4424778761061947No Hit
ATGACCGGCCCAGCAGACTCTTATACACATCTCCGAGCCAACGAGACAAAA10.4424778761061947No Hit
ATAAAGATGTACACGAAACCAGCTGGGTACACAAGTGGTCCGGTGTCACCC10.4424778761061947No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTGCCT10.4424778761061947No Hit
GCTAATTCTCCTGTTACTCAGAAGACTAAACTGCCTAAGGGGTAATGAAAC10.4424778761061947No Hit
CCGATCGGGTCCCCCTTGAAGTCAAAGTTGATGTCCATGTACTTGCCAAAG10.4424778761061947No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)