FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166854
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG15210591.16053555803278No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG8380.5022354873122611No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG6880.41233653373608065No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC5530.33142747551751833No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC5020.300861831301617No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC4830.2894746305153008No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG3430.20556894051086577No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG3400.2037709614393422No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG2940.17620194900931352No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAGG2890.17320531722344085No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG2710.1624174427942992No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC2710.1624174427942992No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG2700.16181811643712465No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC2600.1558248528653793No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG2430.1456363047934122No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG2420.14503697843623767No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC2420.14503697843623767No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGTGAGG2310.13844438850731777No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG2190.13125247222122333No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1920.11507066057751088No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG1860.11147470243446367No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG1830.10967672336294006No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1820.10907739700576552No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1800.10787874429141645No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTTGCGAGG1780.10668009157706738No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1760.1054814388627183No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCCGCTTGGCGAGG1700.1018854807196711No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGATG1670.10008750164814749No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)