FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21914
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1981090.39883179702474No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1220.5567217304006571No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC840.3833166012594688No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC820.37419001551519576No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG800.3650634297709227No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC490.22360135073469017No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG470.21447476499041707No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC460.20991147211828054No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGTCGCTTGGCGAGG450.205348179246144No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG400.18253171488546135No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC380.17340512914118827No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG370.16884183626905175No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAGG360.16427854339691522No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG360.16427854339691522No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG350.1597152505247787No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG350.1597152505247787No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG340.15515195765264217No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG340.15515195765264217No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGATG340.15515195765264217No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC330.15058866478050562No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACATCTCAGGAT320.14602537190836906No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG310.14146207903623254No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC300.136898786164096No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC290.13233549329195948No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTTGCGAGG280.12777220041982296No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGTCGAGG280.12777220041982296No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG270.12320890754768642No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG250.11408232180341335No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGA230.10495573605914027No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGAGAGG230.10495573605914027No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG230.10495573605914027No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)