FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21914
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1993790.97836999178607No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT690.31486720817742087No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG640.2920507438167381No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT550.2509811079675094No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT540.24641781509537283No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCGGCT460.20991147211828054No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT450.205348179246144No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGACT430.19622159350187093No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT410.18709500775759788No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT380.17340512914118827No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT350.1597152505247787No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCATCGCCAAGCGGCT300.136898786164096No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCGGCT290.13233549329195948No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT290.13233549329195948No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT290.13233549329195948No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGTGGCT280.12777220041982296No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT280.12777220041982296No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTATGCCTCGCCAAGCGGCT270.12320890754768642No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTAGCCAAGCGGCT250.11408232180341335No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT250.11408232180341335No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCTCCAAGCGGCT250.11408232180341335No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT230.10495573605914027No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT230.10495573605914027No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT220.10039244318700373No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)