FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8456
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG753689.120151371807No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAAT861.0170293282876064No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG380.44938505203405865No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG350.4139072847682119No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC350.4139072847682119No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC290.34295175023651847No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTCG240.28382213812677387No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC240.28382213812677387No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG230.27199621570482496No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAACTGCTTGGCGAGG210.24834437086092717No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG200.23651844843897823No Hit
ATGACCGGCCCAGCAGTCCACTTTAAAGAGGAAGCAGTGGCATCAATCATC190.22469252601702933No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG180.21286660359508044No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC150.1773888363292337No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG140.16556291390728478No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTTGCGAGG140.16556291390728478No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG130.15373699148533587No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCTAGG130.15373699148533587No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG120.14191106906338694No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACACTC110.13008514664143805No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC110.13008514664143805No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG110.13008514664143805No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG110.13008514664143805No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC110.13008514664143805No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCTGCTTGGCGAGG90.10643330179754022No Hit
GGTTTCCCAGTCCACTAACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC90.10643330179754022No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC90.10643330179754022No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCTGCTTGGCGAGG90.10643330179754022No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC90.10643330179754022No Hit
GGGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG90.10643330179754022No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)