FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences757
Sequences flagged as poor quality0
Sequence length51
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT59478.46763540290621No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG638.3223249669749No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG111.453104359313078No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT70.9247027741083224No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT40.5284015852047557No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT30.3963011889035667No Hit
GATGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTC30.3963011889035667No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTTGCCAAGCGGCT20.26420079260237783No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT20.26420079260237783No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTC20.26420079260237783No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT20.26420079260237783No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCACGCCAAGCGGCT20.26420079260237783No Hit
GTCCAACCCTGTGATGGGAGATGTGTATAAGAGACTGCTGGGCCGGTCATC10.13210039630118892No Hit
CCACTATTAACCTACTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCCT10.13210039630118892No Hit
CATGTCTCGTGGGGATCATCCAAAATATCCATGATTTACACCCAGGCTACC10.13210039630118892No Hit
GACAGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGCTCCATTACCGGCCCAGAAGTCTCTTCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCATCGCCAAGCGGCT10.13210039630118892No Hit
CCCAAGTAGCTGGGATTACAGGTGCGCACCACCACACCCAGCTAATTTTGC10.13210039630118892No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
CTGAATCTGGGCAGCCTGAGATCTCTGTCCACCACAGAGCTCACTACCCAG10.13210039630118892No Hit
GACCAACCCTGTGATGATTGATGCCAAAGAAGTGTCAGCTGCACACAGGGC10.13210039630118892No Hit
GATCCGATGCAGGGGATTACAAAGAAAGCGAGAGTTCAGGGACTCTGGCGA10.13210039630118892No Hit
GACTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTC10.13210039630118892No Hit
CTGGGCCGGTCATCTGTCTCTTATACACAACTGACGCTGCCGACGAATAGA10.13210039630118892No Hit
CCTAACTACTTAGTTATTAGTAAAAGAAAAATGAAACGGAAAAATAATTAT10.13210039630118892No Hit
AACTGGCACGCTCCTAGACCGGCCCAGCAGTCTCTGCCTAGCCGAGCGGCT10.13210039630118892No Hit
CTGATTCTTCTGTGTGCACAATGTCCTGCTAGGGGAATGAAAAATCCTGAT10.13210039630118892No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGCTCCATGACCGGCCCATCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGCACCATGAACGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGACTCTGCCTCGCCAAGCTGCT10.13210039630118892No Hit
TATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATTTT10.13210039630118892No Hit
ATCAAATCAGATGCCTATCCACCAGTTTGGCTTTTTCACTAAATTGGCCAG10.13210039630118892No Hit
GGGAAATGAGGGATTAGATGACACTTGAGTAGCCTTCCAGATCTGAGACGA10.13210039630118892No Hit
ACTGGCACCCTCCATTAACGGCCCAGCAAACTAAACCTCCCCAACACGCAC10.13210039630118892No Hit
CCTTGAGAGAGGATTATGATGCGACTGTGAGTGCGTTCGTAGTTTGAGTTT10.13210039630118892No Hit
GCAAAACCCTGTCTCGACTAAAAATACAAAAATTAGCTGGGCATGGTGGCA10.13210039630118892No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGCTCCATGACTGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC10.13210039630118892No Hit
CTCCAACCCTCAAAAGTCTCATAAAAAAAAATTAAAAAACCCACCAATAGA10.13210039630118892No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
CAATGGCACGCCCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAA10.13210039630118892No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
ACTGTGACGATGTCACCGATCTGGACGTCCCTGAAGCAGGGGGACAGGTGT10.13210039630118892No Hit
GACTGACACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GTTGATGGGTCAGATAAAGACTTTTCTAGTACATAGGATGTGGAAACTGAT10.13210039630118892No Hit
ACAGGCACGCACCATGACCGGCCCAGCAGTCTCTGCCACGCCAATCGGCTC10.13210039630118892No Hit
AACAGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGCACGATCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
CTGGGCCGGTCAACTGTCTCTTATACACAACAGACGCTGCCGACGAAAAGA10.13210039630118892No Hit
CGGTATCCATGGCGGATTAGTTCCAGGACCTCTGGGGACACCAGAATCCAC10.13210039630118892No Hit
GAAAGGAACGCACAAATACCGGCACAGCAGTCTATTCCTCGACAATCGGCA10.13210039630118892No Hit
CAATGGCACGCTCCATGACCGTCCCATCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
CGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCCCTGTCTC10.13210039630118892No Hit
GCTGCAGCAATAAGAAAGCAGCTGCTGAGAAGCCAGAGGAGCAGGGGCCAG10.13210039630118892No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCTGCT10.13210039630118892No Hit
GACTGGCACGCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAGAG10.13210039630118892No Hit
CCCCCAGCTCTCCCTGCTGCCCATCCTGTCATCTGTGTCACTTCTTGTGAT10.13210039630118892No Hit
GGAGTATGGAAGGTTGCTTCCTCATCCAGTCCCTCTCCATCCCAAAGCCTG10.13210039630118892No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATCGAG10.13210039630118892No Hit
AAAAAAACCAAAACCAACAAAACACAAACACAAAAAATCAAAACAATAATA10.13210039630118892No Hit
GACTGGGAAACCCTGTCTTTATACACATCTGACGCTGCCGACGAATAGAGA10.13210039630118892No Hit
GACCGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
CCAATGTTGGTGGGTACAAGGTCAAAAAAAAAAATCTCATCTATCTAAGCT10.13210039630118892No Hit
GACTGGCACGCTCCATGACCGGCCCAGAAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGTACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GACTGGAACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
GATTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.13210039630118892No Hit
TTCAATGAGAGGCTTAAATTTGGGAAAAGGGAAGAGGTTATGTACTATAGA10.13210039630118892No Hit
CCAAGACACGGGGATAAGCCACCGCACAAGCCTCCAACAGAAACTGTCTCT10.13210039630118892No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)