FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154
Sequences flagged as poor quality0
Sequence length51
%GC73

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5233.76623376623377No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT4931.818181818181817No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGAG106.493506493506493No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT42.5974025974025974No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTAGAG21.2987012987012987No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGA21.2987012987012987No Hit
ACAGCAGATGGTGCAGTAGGACTTGTAGCCGTCGTCGTCGTACTGGTACGC21.2987012987012987No Hit
TATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACG21.2987012987012987No Hit
CTGGGCCGGTCATCTGTAAATTATACACATAATACGCAGCCGACGAATAGA10.6493506493506493No Hit
CTGGGCCGGTCAACTGTCTCTTATACACAACTGACGCAGCCGACGAATAGA10.6493506493506493No Hit
CCTCATTATAGAGATGGGGAAACTAAGACTCTGAGCAGCTGTCTTCTACCT10.6493506493506493No Hit
CTACAACCCTCAAAAGTATCATAAAAACAACATAAAAAACCAACCAAAAAA10.6493506493506493No Hit
GTTTGCTCCCAACGCTTTCGCGCCTCAGCGTCAGAACCGGACCAGACAGCC10.6493506493506493No Hit
GACTGGCACGCTCCATGACCAGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.6493506493506493No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT10.6493506493506493No Hit
CCAAAGGGAACAGAATTTGATCCACAGTGAGATAAAAACCCAGACAATGAC10.6493506493506493No Hit
GTAGTGAGCCGAGATTGCGCCATTGCACTCCAGCCTGTGTGACAGACTGAG10.6493506493506493No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT10.6493506493506493No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGTGGGGGGGGGGGG10.6493506493506493No Hit
TACAGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.6493506493506493No Hit
AGGAAGCCAATTGATATCATAGCTCAGACCATACCTATGTATCCAAATGGT10.6493506493506493No Hit
CCTTACAGAGGGGAAGTGGGATGGATAGAAACATGTGCAGATCCACCTGTC10.6493506493506493No Hit
CTGTTAGTCTGGGGCATCCCAGTGAACTGTGATGAGGCTGAAATCGAAGAG10.6493506493506493No Hit
AACTACAACAAAAAAATAAAATCAAATAATAAACTGAAAATCCAATACAAT10.6493506493506493No Hit
GTACTCTCACAGGGTTGAGCGGTGAAAAAAAATTATAAATGTCATTCTCAG10.6493506493506493No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.6493506493506493No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA10.6493506493506493No Hit
ACAGCAGATGGTGCAGTAGGACTGGTAGCCGTCGTCGTCGTACTGGTACGC10.6493506493506493No Hit
ACTGATTACACTGGAAACTGGTAAAGAAAGGTAAACAAGCAAACATTTATT10.6493506493506493No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGAATAGAGA10.6493506493506493No Hit
ATTGAGAACCAATACTAACAACTTTACATAAATAACAACATTTAAAACTCC10.6493506493506493No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTATTGGGTAA10.6493506493506493No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGG10.6493506493506493No Hit
CTTCTATTGGTAGGTATTTTACTAAGAATGACATTAATGGGAACAGTGTAA10.6493506493506493No Hit
GACTGGCAAGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.6493506493506493No Hit
CTGGGCCGGTCATCTGTCTCATATACACATCTGACGCTGCCGACGAATAGA10.6493506493506493No Hit
GACAGGGAAAACCCGTCACATAAAAAAAAAATACACATCCCACCAAAATAT10.6493506493506493No Hit
TTTTTTTGGTGAGGATTGTTCTTCGGTCCAGGAACGTCTTTGGAAGTTAAC10.6493506493506493No Hit
GAGACAAAGTGGGAGCCAGCGAAGCCACGCTGCTGAACATGCTCAACATCT10.6493506493506493No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)