FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215943

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215943
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15326
Sequences flagged as poor quality0
Sequence length51
%GC67

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT878257.30131802166254No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT519933.92274566096829No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1310.8547566227326112No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT330.21532037061203183No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT320.2087955108965157No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT310.20227065118099963No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT200.13049719431032233No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGAGGA180.1174474748792901No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT170.11092261516377397No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)