FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101856
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT9439192.67102576185988No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3320.3259503612943764No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2770.2719525604775369No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2400.23562676720075398No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2290.22482720703738612No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT1980.19439208294062205No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT1630.16002984605717877No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT1540.1511938422871505No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1360.13352183474709395No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1340.13155827835375433No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1250.12272227458372605No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1230.12075871819038643No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT1230.12075871819038643No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1110.10897737983034873No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCCGCCTCGCCAAGCGGCT1070.10505026704366949No Hit
GACTGGCACGCTCCATGACTGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1060.10406848884699968No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)