FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215963

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215963
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15614
Sequences flagged as poor quality0
Sequence length51
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1371187.81221980274113No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4262.728320737799411No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAATCTCTGCCTCGCCAAGCGGCT1150.7365185090303573No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT780.49955168438580766No Hit
GACTGGCACGCTCCATGATCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT780.49955168438580766No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT590.37786601767644423No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT580.3714615089022672No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT510.32662994748302804No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT330.2113487895478417No Hit
GACTGGCACGCTCTATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT280.1793262456769566No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT250.16011271935442553No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT230.14730370180607147No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTTCCTCGCCAAGCGGCT190.12168566670936339No Hit
GACTGGCACGCTCCTTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT180.11528115793518637No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT170.10887664916100935No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGTGGCT170.10887664916100935No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT170.10887664916100935No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTATGCCTCGCCAAGCGGCT160.10247214038683232No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCGGCT160.10247214038683232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)