FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215971

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215971
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70251
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT6435391.60438997309647No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3070.43700445545259137No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2450.3487494839931104No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT2000.2846934563209065No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1890.2690353162232566No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1520.21636702680388892No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT1260.17935687748217105No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT1140.1622752701029167No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1080.1537344664132895No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT1050.14946406456847589No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1020.1451936627236623No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1000.14234672816045324No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT990.14092326087884868No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT980.13949979359724418No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGTGGCT780.11103044796515352No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCGGCT730.10391311155713086No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)