FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44464
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG4019090.38772939906441No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG2650.5959877653832314No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGAGCTACAT1830.4115689096797409No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG1660.37333573227779776No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1580.3553436487945304No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1560.35084562792371354No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1110.24964015833033468No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1090.24514213745951782No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG910.20465994962216624No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG820.18441885570349045No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG810.18216984526808205No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG760.17092479309103994No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAGG740.16642677222022312No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG730.1641777617848147No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC680.15293270960777258No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC660.14843468873695576No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGA640.1439366678661389No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG640.1439366678661389No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC620.13943864699532205No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG580.13044260525368837No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC580.13044260525368837No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC570.12819359481827997No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG560.12594458438287154No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTTGCGAGG510.11469953220582943No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC500.11245052177042102No Hit
GGTTTACCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG480.10795250089960418No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCCGCTTGGCGAGG460.10345448002878734No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)