FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAAT24154.89749430523918No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG5712.984054669703873No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTA4510.250569476082005No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG71.5945330296127564No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAATC61.366742596810934No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACGCGTAG40.9111617312072893No Hit
GGTTTCCCAGTCCCTATACACATCTCCGAGCCCACGAGACGCGTAGTAATC30.683371298405467No Hit
GGTTTCCCAGTCCACTATACTGTCTCTTATACACATCTCCGAGCCCACGAG30.683371298405467No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTCGTAGTAAT20.45558086560364464No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACGCGTAGTAATCG20.45558086560364464No Hit
GGTTTCCCAGCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAATC20.45558086560364464No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACGCGTAGTAATCT20.45558086560364464No Hit
GGTTTCCCAGTCCACTATACACTCTCCGAGCCCACGAGACGCGTAGTAATC20.45558086560364464No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACGCGTAG20.45558086560364464No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAATC20.45558086560364464No Hit
GTCACCTAAGCTGTTTATGTTCTCACTTCTGTTTATTTCCACCAGTGTGTT10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACACATCTACGAGCCCACGAGACGCGTAGTAAT10.22779043280182232No Hit
GGTTTCCCGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAATC10.22779043280182232No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTA10.22779043280182232No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCCGAGCCCACGAGACGCGTAG10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCAACGAGACGCGTAGTAAT10.22779043280182232No Hit
ATGACCGGCCCAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGT10.22779043280182232No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACGCGTAG10.22779043280182232No Hit
GGTTTCCCAGTCCACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGT10.22779043280182232No Hit
GAGCGTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGA10.22779043280182232No Hit
GTTTAATTCCGGGCATGGTGGCTCACGCCTGTAATCCCAACACTTTGTGAG10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCGACATGAGCCGCTTGGCGAGG10.22779043280182232No Hit
GGTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACGCGTAGTAATC10.22779043280182232No Hit
GGTTTCCCAGTCCTGTTCTTATACACATCTCCGAGCCCACGAGACGCGTAG10.22779043280182232No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTA10.22779043280182232No Hit
GGTTTCACAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAAT10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTATC10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACTTATACACATCTCCGAGCCCACGAGACGCGT10.22779043280182232No Hit
ACTGAGGCGAGCGGTCAAACCCGATCCTCGATTGGTGCAGCATGATACCAA10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACTGCCAGTCCTGTCTCTTATACACATCTCCGA10.22779043280182232No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTA10.22779043280182232No Hit
ACTTGCCTAGGATCCCAAATTTAGCAGAGTGGGTAGAAACTGTCATTAAAA10.22779043280182232No Hit
TCCTCGCCACCGTTCTCACCTCTTTGTCCGCTGCCTTCTCCTCAATGCCTA10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACACATCTCCGGCCCACGAGACGCGTAGTAATC10.22779043280182232No Hit
GGATTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAAT10.22779043280182232No Hit
GCCAGCGCTGCTTCCCCTGCTAAGTCTCAGGAAAAAACTGGGGCTGGGGAA10.22779043280182232No Hit
ATGACCGGCCCATCAATCATCACAGGGTTGGTCCTGTCTCTTATACACATC10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACGCGTAGTAAT10.22779043280182232No Hit
GCTTTATCTGGTTCCAGATAATTATTTTTGTAACTGTTTCATGACTCAGAT10.22779043280182232No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGATCCGCTTGGCTAGG10.22779043280182232No Hit
GGTTTCCCAGTCCTGTCTTTTATACACATCTCCGAGCCCACGAGACGCGTA10.22779043280182232No Hit
GGGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGT10.22779043280182232No Hit
GTTCCTAGATCCACCTGGCCTGGCTTCCCGCCCCTGTCAAACATTCCTACC10.22779043280182232No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.22779043280182232No Hit
CCAGCTGCCGGGCATACTCGATGACCTGTTTGGCCAGTTCTGTGGCTGTCT10.22779043280182232No Hit
CTGAGATAACTGTTTTCATCTACAGAATTGCATTTTTGCTTTTAAAGAGGT10.22779043280182232No Hit
GGTTTCCCAGTCCTGTCCTTATACACATCTCCGAGCCCACGAGACGCGTAG10.22779043280182232No Hit
CGTATGCCTTTGAGGCTAGGGACTATGTTGTAAGTTCACCTGTGATGGCCA10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACACATCCCGAGCCCACGAGACGCGTAGTAATC10.22779043280182232No Hit
GTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACGCGTAGT10.22779043280182232No Hit
GCCAATTTTGTATCTTTAGCAGAGACATGTTGCTCACACAAAGCATGTTTG10.22779043280182232No Hit
GGTTTCCCAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTA10.22779043280182232No Hit
GAATTCTACCATCCTCTCCCATACTCTAGCCAACCAGTATCGAATGCAATT10.22779043280182232No Hit
GGGTTCCCAGTCCACTATACTGACGTCGCAAAATTATCCGCATGGCGAGGC10.22779043280182232No Hit
GGTTTACCAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAAT10.22779043280182232No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACTAGACGCGTA10.22779043280182232No Hit
GGTTTCCCAGTCTACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.22779043280182232No Hit
GGTATCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGCGTAGTAAT10.22779043280182232No Hit
GGTTTCCCAGTCCTGTCTCTATACCATCTCCGAGCCCACGAGACGCGTAGT10.22779043280182232No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.22779043280182232No Hit
GGTTTCCCAGTCCACTAAACACATCTCCGAGCCCACGATACGCGTAGTAAT10.22779043280182232No Hit
ATTTTCCGCCGCCCATCGATGTTGGTGTTGAGTACTCGCAAAATATGCTGG10.22779043280182232No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACGCGT10.22779043280182232No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.22779043280182232No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.22779043280182232No Hit
GAGTCCGAACACAGTTTGCTGATTCCAAGAAGACTCCCAGCCGACCAGGCT10.22779043280182232No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAAAAAGAGCCGCTTGGCGAGG10.22779043280182232No Hit
GGTTTCCCAGTCCACTATATTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.22779043280182232No Hit
GGTTTCCTAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.22779043280182232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)