FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006215977

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215977
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439
Sequences flagged as poor quality0
Sequence length51
%GC85

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27562.64236902050114No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT5712.984054669703873No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT4911.161731207289293No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT71.5945330296127564No Hit
TATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACG30.683371298405467No Hit
GGGGGGTGGGGGGGGGGTTGGGTGGGGGGGGTGGTGGGGTTGGGTTGGGGG10.22779043280182232No Hit
GCTAATTTGTGTATTTTTAGTAGAGACGGGGTTTTACCATGTTGGCCAGGC10.22779043280182232No Hit
GGGGGGGGGGGGGGGGGGGGGGGGCCCCCCCCCCGGGGGGGCGCCCCCCGC10.22779043280182232No Hit
GTCAGTTGTGTCTGGATTCCAGAGGGAGGAAGGTAGAATGAGGCATGTTGA10.22779043280182232No Hit
GACTGGGACACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT10.22779043280182232No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCT10.22779043280182232No Hit
GACTGGCACGCTCCATGACCGTCCCAGCAGTCTCTGCCTCGCCACGCGGCT10.22779043280182232No Hit
GACTGGGAAACCCTGTCTCTTAACACATCTGACGCTGCCGACGACTCCTTA10.22779043280182232No Hit
GACTGGGAAACCCTGTCTCTTATACACTCTGACGCTGCCGACGACTCCTTA10.22779043280182232No Hit
GTCTCTAGTGATCCCTGAAAAGTTCCAGCATATTTTGCGAGTACTCAACAC10.22779043280182232No Hit
GACTGGCACGCTCTATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG10.22779043280182232No Hit
GGCAGTGACCAAGGAGCTCTTACAGATGGACCTGTACGCGCTGCTAGGCAT10.22779043280182232No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCACTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GACTGGCACGCTCCATAACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GACTGGGAAACCCTGTTTCTTATACACATCTGACGCTGCCGACGACTCCTT10.22779043280182232No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCAT10.22779043280182232No Hit
CCACAGAACTGGCCAAACAGGTCATCGAGTATGCCCGGCAGCTGGCTGTCT10.22779043280182232No Hit
GACTGACACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GACTGGCACTCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.22779043280182232No Hit
GATTCCTAGTTCCATTATAAGACCTCTTTAAAAGCAAAAATGCAATTCTGT10.22779043280182232No Hit
CCAAAGACCTGGCTTTTGGGTAGGAATGTTTGACAGGGGCGGGAAGCCAGG10.22779043280182232No Hit
GACTGGGAAACACTGTCTCTTATACACATCAGACTCTGACGACGACTCCTT10.22779043280182232No Hit
CCTTCCTTTCTTCCTTTCTTTTCCTTTCCCTTCCTTTCTTCTTTCTCTTTT10.22779043280182232No Hit
ACCGATTGGTATCATGCTGCACCAATCGAGGATCGGGTTTGACCGCTCGCC10.22779043280182232No Hit
GACTGGCACGATCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GACCAACCCTGTGATGATTGATGGGCCGGTCATCTGTCTCTTATACACATC10.22779043280182232No Hit
ATGGGAACCTAAAAATTCTAATATAAAAATCTTAAACATACGACGAATACA10.22779043280182232No Hit
CCATCTGAAGAAGAGAGAGAGGGAGGAAGCAGCTCTTTCCCCAGCCCCAGT10.22779043280182232No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GACTGGGAAACCCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCT10.22779043280182232No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GACTGGCACGCTCCTGTCTCTTATAACATCTGACGCTGCCGACGACTCCTT10.22779043280182232No Hit
CTGGGTCCCCAGTCTTGGTGCTGTGAATGGGGTTAGTGGCTGTGCCATGAC10.22779043280182232No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.22779043280182232No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTTA10.22779043280182232No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT10.22779043280182232No Hit
GATTTAAAGGAGAGAACAGAAAGGTTGGAGATGTAGCTGAAAAGATGGCTT10.22779043280182232No Hit
GGCAGGGAAAACCAGTAAAATATAAACAAAATAATCTTCCCACCACACCAT10.22779043280182232No Hit
GATTTTAATGACAGTTTCTACCCACTCTGCTAAATTTGGGATCCTAGGCAA10.22779043280182232No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGACTCCTTA10.22779043280182232No Hit
GGGGGGTGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG10.22779043280182232No Hit
GGATGGTCAAACACAAAACAATAAAAAAACACAACCACCCCAAAACAAAAA10.22779043280182232No Hit
GGGGGGGGGGGGGGGGGGGGGGGGTGGTGGCAATGGCGGGCGCCGGGCCGC10.22779043280182232No Hit
CCTGGTCGGCTGGGAGTCTTCTTGGAATCAGCAAACTGTGTTCGGACTCCT10.22779043280182232No Hit
GAGCTTAACTTGGGAATTGCATTCGATACTGGTTGGCTAGAGTATGGGAGA10.22779043280182232No Hit
AACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.22779043280182232No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACTCCTT10.22779043280182232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)