FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006215997

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006215997
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50531
Sequences flagged as poor quality0
Sequence length51
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT4441087.88664384239378No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT19513.8609962201420913No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCAGCT2230.44131325325047993No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1900.37600680770220263No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1300.25726781579624386No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1290.2552888325978112No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1260.2493518830025133No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCAGCT920.18206645425580337No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT760.15040272308088104No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCAGCT720.14248679028715044No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT660.1306128910965546No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT650.12863390789812193No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT630.12467594150125665No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT610.12071797510439135No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCAGCT580.11478102550909343No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT570.1128020423106608No Hit
AACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT520.10290712631849756No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)