FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216001

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216001
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences291
Sequences flagged as poor quality0
Sequence length51
%GC90

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21674.22680412371135No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA186.185567010309279No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT165.498281786941581No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT113.7800687285223367No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA20.6872852233676976No Hit
AGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGT10.3436426116838488No Hit
GCAGCAGTCAGGGACATTTCTGAAGCGAGCGTCTTCGATGCCTATGTGCTT10.3436426116838488No Hit
CTGGGCCCGTAAAATCTCTAATATACAAAACTGAAGCAGCCGACCATATTC10.3436426116838488No Hit
GGGGGGTCCGGGGCTGGCCGCTGTGGGGTCGCGGGCCTGGTGGGGCGGGAG10.3436426116838488No Hit
GACTTGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGATATGCAG10.3436426116838488No Hit
GGGGGGGGGGTGGGGGGGGGGGGTGGGGGGGTGGGGGGGGGGGGGGGGGGG10.3436426116838488No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.3436426116838488No Hit
GGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.3436426116838488No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.3436426116838488No Hit
GAGAGGCGGAGGGTTTGAGTAATTCTCCTGCCTCAACTTCCCCAGTAGCTG10.3436426116838488No Hit
GGGGGGTGGGGGGGGGGTGGTGGTGGTGGGTGCGGGGGGCGGGGGGGGGGT10.3436426116838488No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGCTGGGGGGAGGTCGGGGATGTCGCAG10.3436426116838488No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACTCTGCCGACGAGATGCA10.3436426116838488No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT10.3436426116838488No Hit
GAGAAAGGGAGGGGTGAAATGAGAAGAGCCCCGTTCTTCCTCAGTGCTGGG10.3436426116838488No Hit
GGGGGGGGGGGGGGGGGGGGGGTGGGCTCAGGGGACTGGGCGCCCCCCGGC10.3436426116838488No Hit
ACTGACTGGGCAGTCCCCAGTATCTCTTTAATGGTTCCAGAGAGTTCTCTG10.3436426116838488No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGACAAGCGGCT10.3436426116838488No Hit
TCTTCAAGGGGTCTACATGGAAACTGTGAGGAGGGGAGATTCAGTGTGGTG10.3436426116838488No Hit
GGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.3436426116838488No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCAAAGCGGCT10.3436426116838488No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG10.3436426116838488No Hit
TATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACG10.3436426116838488No Hit
CCTGGTGTCTGGGCTTCCGCAGCTTCTTCTTCTTGAAGTAAGCATCAGTAA10.3436426116838488No Hit
AGGATGTGCCTAATTCACATCTAACTCCTGTCCTAGTAATTACATCCTTTG10.3436426116838488No Hit
ATAACAGAAGATCGCATTGCAGATGATATCAGGATGTGGTTTCCAGCTTTG10.3436426116838488No Hit
GATGAGACTGAGGTTTACTATGTGTATCTGTTACCCATGGAAAATTAGTCC10.3436426116838488No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTC10.3436426116838488No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)