FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences200
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTACGCTGCAT11256.00000000000001No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGC2211.0No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG157.5No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG84.0No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTACGCTGCATC42.0No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACTACGCTGCATC31.5No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACTACG21.0No Hit
GGTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCT21.0No Hit
ATGACCGGCCCAGCAGTCTCACAGGGTTGGACCTGTCTCTTATACACATCT21.0No Hit
ATGACCGGCCCATCAATCATCACAGGGTTGGACCTGTCTCTTATACACATC10.5No Hit
ATGACCGGCCCAGCAATCATCACAGGGTTGGACCTGTCTCTTATACACATC10.5No Hit
CCAAATGGTCAATCTTCTTATCATAATGTTGAGTGGAAGAAGCCAGGTCCA10.5No Hit
GGCTGGAATGCAGTGGTGCCATCTCGGCTCACTGCAACCTCCATCTCCCGG10.5No Hit
GGTTTACCAGTCCACTATACACATCTCCGAGCCCACGAGACTACGCTGCAT10.5No Hit
GGTTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACTACGC10.5No Hit
GGTTTCCCAGTCCTCTATACACATCTCCGAGCCCACGAGACTACGCTGCAT10.5No Hit
GGTTTCCCAGTCCAGTCTCTTATACACATCTCCGAGCCCACGAGAATACGC10.5No Hit
GGTTTCCCAGTCCCGTCTCTTATACACATCTCCGAGCCAACGAGACTACGC10.5No Hit
GTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTACGCTGCATC10.5No Hit
GTGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAACCATCA10.5No Hit
ATGACCGGCCCAGCAGTCTCACAGGGTTGGTCCTGTCTCTTATACACATCT10.5No Hit
GGGGTAGGAGGGGCGCCCTAGGCACAGCTGGGCCCTTGAGACAGCAGGGCT10.5No Hit
GGTCTACTGCTGCAATTTAGATTCCTTTCCCTTCTCTCCAGTTCTCCTTCC10.5No Hit
CCTGCAATCCTTTTTCTTTTTTAATGACCAACAAAGTCATCACTACAACAT10.5No Hit
ACTTGGGGCCAGGCACAGTGGCTCACACCCGTAATTCCAGCACTTTGGGAG10.5No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACTACGCT10.5No Hit
CCCCAAGTTCAGTGATTTGCTAAGAAGACTCAGAGGACTCAGCATTTAATT10.5No Hit
GGTTTCCCAGTCCACTATACACATCTCCTAGCCCACGAGACTACGCTGCAT10.5No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTACGCTACAT10.5No Hit
ATGACCTGCCCAGCAGTCTCACAGGGTTGGACCTGTCTCTTATACACATCT10.5No Hit
CCATTATGGCTGGAATTTAGTAAGCTGAGGTGGAAGAGGTAAGAAGAGACC10.5No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACTACGCTGCAT10.5No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC10.5No Hit
GGTTTCCCAGTCCACTATACTAACGTCTCCAACATGAGCCGCTTGGCGAGG10.5No Hit
CCACTATGTGCCTCTGTGAAGCCCTTGCTCCAGGCACACGGCTGTCTCTTA10.5No Hit
TCAAAATGGTAGTTTAAAGTGAATGCAGTAGGAGCAGAGAAGAGAGAATCC10.5No Hit
GGTTTCCCAGTCATGTCTCTTATACACATCTCCGAGCCCACGAGACTACGC10.5No Hit
GATATTGCTAGGGTGGCGCTTCCAATTAGGTGCATGAGTAGGTGGCCTGCA10.5No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGATCCCACGATACTACGC10.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)