FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216008

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216008
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3377
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG287385.07551080840983No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAGCGCTCAT1313.87918270654427No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGCG260.769914124962985No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG150.44418122594018355No Hit
ATGACCGGCCCAGCAGTCTCAAGCAGTGGTATCAATCATCACAGGGTTGGA140.414569144210838No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG130.3849570624814925No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC100.29612081729345574No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG90.26650873556411014No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG80.23689665383476458No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC70.207284572105419No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG60.17767249037607344No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG60.17767249037607344No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG60.17767249037607344No Hit
ATGACCGGCCCAGCAATCATCACAGGGTTGGACCTGTCTCTTATACACATC60.17767249037607344No Hit
GNTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG60.17767249037607344No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG50.14806040864672787No Hit
GGGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG50.14806040864672787No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC50.14806040864672787No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG50.14806040864672787No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGATG50.14806040864672787No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC50.14806040864672787No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG40.11844832691738229No Hit
ATGACCGGCCCAGCATCAATCATCACAGGGTTGGACCTGTCTCTTATACAC40.11844832691738229No Hit
ATGACCGGCCCAGCAGTCTCACAGGGTTGGACCTGTCTCTTATACACATCT40.11844832691738229No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCCGCTTGGCGAGG40.11844832691738229No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG40.11844832691738229No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG40.11844832691738229No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC40.11844832691738229No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)