FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3377
Sequences flagged as poor quality0
Sequence length51
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT290185.9046490968315No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1444.264139769025762No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATATGCA290.8587503701510216No Hit
GTCCAACCCTGTGATGATTGATACCACTGCTTGAGACTGCTGGGCCGGTCA130.3849570624814925No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT110.32573289902280134No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT90.26650873556411014No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT80.23689665383476458No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT80.23689665383476458No Hit
GTCCAACCCTGTGATGATTGCTGGGCCGGTCATCTGTCTCTTATACACATC70.207284572105419No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT70.207284572105419No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT70.207284572105419No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.17767249037607344No Hit
GACTGGCACACTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.17767249037607344No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT50.14806040864672787No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT50.14806040864672787No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT50.14806040864672787No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGAT40.11844832691738229No Hit
GTCCAACCCTGTGATGATTGATGCTGGGCCGGTCATCTGTCTCTTATACAC40.11844832691738229No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT40.11844832691738229No Hit
GTCCAACCCTGTGAGACTGCTGGGCCGGTCATCTGTCTCTTATACACATCT40.11844832691738229No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)