FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216011

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216011
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5616
Sequences flagged as poor quality0
Sequence length51
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT489887.21509971509973No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2414.2913105413105415No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC360.641025641025641No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT190.3383190883190883No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT160.2849002849002849No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT140.24928774928774927No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT130.23148148148148145No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT120.2136752136752137No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT110.19586894586894588No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT110.19586894586894588No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT100.17806267806267806No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT90.16025641025641024No Hit
GACTGGCACTCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT80.14245014245014245No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT80.14245014245014245No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT80.14245014245014245No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT80.14245014245014245No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCTCCAAGCGGCT80.14245014245014245No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT70.12464387464387464No Hit
GACAGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.10683760683760685No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCGGCT60.10683760683760685No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.10683760683760685No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT60.10683760683760685No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTTCCTCGCCAAGCGGCT60.10683760683760685No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)