FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences285
Sequences flagged as poor quality0
Sequence length51
%GC81

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG16256.84210526315789No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC5017.543859649122805No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT196.666666666666667No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT82.807017543859649No Hit
TATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACG31.0526315789473684No Hit
GACTGGGAAACCCTGTCTCTTATACCATCTGACGCTGCCGACGATACTCCT20.7017543859649122No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGG20.7017543859649122No Hit
GTTCACGAGGGACCCCATTCGGATTCTTGTTAGGAAGGAAGAGTTGACCTT10.3508771929824561No Hit
CTCCAACCATCATATGAATCATATACACATCTCACACATCAGAATAAAATA10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATTACACATCTGACGCTGCCGACGATACTC10.3508771929824561No Hit
ACTTTTGGCAGGATAATGACTGGAGCACATTCACGTTTTTAAAATTCCGTC10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCA10.3508771929824561No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCACGCGGCT10.3508771929824561No Hit
ACAGCCAGAAGAGATATGAGGAAATTGTTAAGGAAGTCAGCACTTACATTA10.3508771929824561No Hit
GCCATCGTGGTGTGTTCTTGACTCCGCTGCTCGCCATGTCTTCTCACAAGA10.3508771929824561No Hit
GACTGTGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTGC10.3508771929824561No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCCT10.3508771929824561No Hit
GGCAAACCTGTATAATAAACACAAATTAACAATCCCACGAAAATCCTTGTG10.3508771929824561No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCCT10.3508771929824561No Hit
GACTGGCACGCTCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTC10.3508771929824561No Hit
GGGGGGGGGAAACCCGCCCATTTAAAAAAAAAAAACAACACACCAAAAAAC10.3508771929824561No Hit
GGGGGGTGGGTGGGTGGTGTCGTGGTTTGTGCGGGGTGTGGGGGGGGTTGG10.3508771929824561No Hit
CTCCAACCATCATATGAATCATATACACATCTCACACATCAGAATAAAAAA10.3508771929824561No Hit
GACTGGGAAACCCGGTCTCTTATACACATCTGACGCTGCCGACGATACGCC10.3508771929824561No Hit
AACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC10.3508771929824561No Hit
GTCTACACCACAGATCCTTCCATCAAATGAAGGTGTTAATCCACGTTTATC10.3508771929824561No Hit
CTGGGCCGGTCATCTGTCTCTTATACTCATCTGACGCTGCCGACGATACTC10.3508771929824561No Hit
GATTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC10.3508771929824561No Hit
GATTTCCCAGTATAGTGGACTGGGAACCCCTGTCTCTTATACACATCTGAC10.3508771929824561No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.3508771929824561No Hit
GGGGGGGGCGGGTGTGTGGGGGGGCGGTGGGTGTGTTGGTGTTGGGTGTTC10.3508771929824561No Hit
GGGGGGGGGGGGGGGGGGGGGGTGGGCTGAAGATAGCGGGGACCGGACCGC10.3508771929824561No Hit
GGGGGGGGGGGGGGGGGGGTGGGGGGGTGGGGGGGGTGGTGGGGGGGGGGG10.3508771929824561No Hit
GACTGGGAAACCCTGTCTCGTATACACATCTGACGCTGCCGACGATACTCC10.3508771929824561No Hit
GACTGGCAAACACAGTCTCTTATACACATCTGACTCTAAAAAAGAAACTCC10.3508771929824561No Hit
GACTGGCACGATCCATGACAGTCCCAGCACACTCAACCTCGCAAAGCGTCT10.3508771929824561No Hit
GACTGGCACAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGTCA10.3508771929824561No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT10.3508771929824561No Hit
GGTAACCCTGTCTCTTATACAAATATTACGCTGCCGACGATAATCCTTGTG10.3508771929824561No Hit
GGAAACCCTGTCTCATATAAACAAATGACGCTGCCGACGATACTCCATGTG10.3508771929824561No Hit
CTGCTGGATGTACCTTTTTTCTGAGCTCTGGTTTGCCTTTCTTGACTGTGG10.3508771929824561No Hit
ACTTCCAGGTAGCCCTTTTCTACTGGCACAGCTGCTGGCATTCACTCATGC10.3508771929824561No Hit
GCTAAATGGACAGGAGCATGTGTGTAGTAACAATCAAGCCATTCTTCTTTC10.3508771929824561No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG10.3508771929824561No Hit
GGGGGGGGGACCCAGCGGCTTTTAAAAAAAACACACAACCCCCCAAAAAAC10.3508771929824561No Hit
TGGATTTAGCTGGGAGATGCCTTTAGGGGGCCAGAGCCCTCCTAATTGGCT10.3508771929824561No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)