FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79147
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT7223091.2605657826576No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2730.3449277925884746No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2460.3108140548599442No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT2350.2969158654149873No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2320.29312545011181723No Hit
GACTGGCACGCTCCATGACCGGTCCAGCAGTCTCTGCCTCGCCAAGCGGCT1970.2489039382415No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT1830.2312153334933731No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1810.2286883899579264No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTTGCCAAGCGGCT1560.19710159576484262No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT1550.1958381239971193No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT1290.16298785803631216No Hit
GACTGGCACGCTCCATGACCGGAACCTCCGAACTGCGCCCCGGCCAGGGAG1290.16298785803631216No Hit
GACTGGCACGCTCAATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1260.15919744273314212No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT1250.15793397096541878No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1150.14529925328818527No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGTGGCT1010.12761064854005838No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT970.12255676146916497No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT960.12129328970144163No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT920.11623940263054823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)