FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences334
Sequences flagged as poor quality0
Sequence length51
%GC84

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20461.07784431137725No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC4011.976047904191617No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT4011.976047904191617No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT123.592814371257485No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC20.5988023952095809No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.5988023952095809No Hit
GCTGAGTGAGGAGAAAGGAGTGAAGAGTGAGAGCAGCCATTTCCCAGGGCT10.29940119760479045No Hit
GCCTCCTCCCGGCTGTTCGTGCGGTTAGGTGCGGACTTGGACTAAAGGTTC10.29940119760479045No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCA10.29940119760479045No Hit
CACTGGAACGCTCCATGACCGGCCCAGCAGTCTCAGCCTCGCCAAGCGGCT10.29940119760479045No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGAGCTGCCGACGATACTCCT10.29940119760479045No Hit
GCTGATCAGCAACTTGTGGAAATAGACAAAAAATATGCTGGATTCATTCAT10.29940119760479045No Hit
TAGGTCTCCATAAAAATTATTTCTAAATCATCTATTTTTTTCTATTAACAT10.29940119760479045No Hit
GACTGGGAAACCCTGTCTCTTATACACACCTGACGCTGCCGACGATACTCC10.29940119760479045No Hit
GACTGGGAAACCCTGTCTCTTATACAGATCTGACGCTGCCGACGATACTCC10.29940119760479045No Hit
GACTGGGAAACCCTGTCTCTTATACAATCTGACGCTGCCGACGATACTCCT10.29940119760479045No Hit
ATCGACTCCTTCGTTAAAATCGAAATTTCTTCATTTCATACTAAACACAAA10.29940119760479045No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTAACGCTGCCGACGATACTCC10.29940119760479045No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGG10.29940119760479045No Hit
GGGGGGTCGTTGTCTGTCTTTTCTTCTACCTCAACCTCCTATATACGAAAT10.29940119760479045No Hit
GGGGGGTGGGGGGGTGGGGGGGCGGGGGCGGGGGTGTGGGGGGTGGGGGGG10.29940119760479045No Hit
CACTGGCACGCTCCATGACCGGCCCAGCAGTCACTGCCTCGCCAAGCGGCT10.29940119760479045No Hit
NACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.29940119760479045No Hit
CAGAGTTAGAAGAGTTTTTCTAATTTTGGGGTTTATAGACCTTTTGCAAAT10.29940119760479045No Hit
GACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC10.29940119760479045No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.29940119760479045No Hit
CGGGGGGGGGGGGGGTGGTGGGGGGTGGGTGGCGGGGGGGGGGGGGGGGGG10.29940119760479045No Hit
GACTGACACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.29940119760479045No Hit
GGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.29940119760479045No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGCG10.29940119760479045No Hit
GCTATTTTGAAGTATTCAAGCAGAGGAATTCCCTAACACTGACCTGTCTCT10.29940119760479045No Hit
CCTCTTGGGCAGCCCACAGCCTGTGGCCGGCAAGTCCCTCCGTGGAGGCGC10.29940119760479045No Hit
GATAACGGAGGAGATGATGGATCAGGCAAATGATAAAAAAGTGGCTGCTAT10.29940119760479045No Hit
GAATGGCACGCTCCATGACCGGACCAGCAGTCTCTGCCTCGCCAAGCAGCA10.29940119760479045No Hit
CCTGTACACGTGGCTTTCAAGGCTGTACTAAAGAAAACATGAAATCCCATA10.29940119760479045No Hit
GGTAAAAGGCTGTTTTCCATCCTTACATTCCCTCATTTGTCTACGTCATAG10.29940119760479045No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.29940119760479045No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTTGCCAAGCGGCT10.29940119760479045No Hit
GGAAAACCTTTCTCATAAACACAACAGACGCAGCCGACGATACACCTTTTG10.29940119760479045No Hit
CCATAAAGATATGATGTGATAAGCACGTGAATTTTTTGTTGTAATAGGAAT10.29940119760479045No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)