FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216029

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216029
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences221
Sequences flagged as poor quality0
Sequence length51
%GC85

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13761.990950226244344No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2410.85972850678733No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC229.95475113122172No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT125.429864253393665No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCG10.4524886877828055No Hit
GGCTGGGGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCCGGTGGATCAC10.4524886877828055No Hit
CTGGGCCGGTCATCTGTCTCGTATACACATCTGACGCAGCCGACGATACTC10.4524886877828055No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.4524886877828055No Hit
GGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTC10.4524886877828055No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCAGCT10.4524886877828055No Hit
CAGAATACAGAACATCAATGTTTAATGTTAATACGGTAGGCAAAGAGACCC10.4524886877828055No Hit
CCGGTTCTGCAGCCTCATACCTCTAAAGCTTCTGGGCCCTGTCTGCGGTTC10.4524886877828055No Hit
GACTGGGAAACCCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTC10.4524886877828055No Hit
GACTGGGACACCCTGTCTCTTATACACATCTGACGCTGCCGACGATACTCC10.4524886877828055No Hit
GGAGGATGGTCCCCCCATATTCAGACAAGGTTTCACGTGCCTCGCCCTACT10.4524886877828055No Hit
TTTGCCAGGCGGCCGCGACGGCGCTGGGTAAAATGGCAGTGCTGAGCCTCG10.4524886877828055No Hit
GAATGTAACTCTCCAAGAAATCACAATCAATATCAAAAACGCCAAGCGCAA10.4524886877828055No Hit
CGGTAGTCAATACATTATATACATTAACAAAAAATCTTTTAAAAAAAAAAC10.4524886877828055No Hit
GTACCCAGCTTACCTTCTCCACACTGGCTGCATCTTTGAACAGGATAAACC10.4524886877828055No Hit
CTGGGCCGGTCAAATGTCTCTTAAACACATCAGACGCAGCCGACCATAATC10.4524886877828055No Hit
CCACCTGCTCCTCTTCCTTCCAGGCCTCCTCCTTGTGGCTACCCTGGTCCT10.4524886877828055No Hit
GCTTTAAGCAGGGGGAACGACAACAAAACACATCAGTTGTATTGTAACAGT10.4524886877828055No Hit
GACTGGCACGCTCCTGTCTCTTATACACATCTGACGCTGCCGACGATGCTC10.4524886877828055No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGG10.4524886877828055No Hit
GGAGTGGTGGTGGGTACCAGTAGTCCCAGCTGCTCGAGAGGCTCTGTCTCT10.4524886877828055No Hit
GGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.4524886877828055No Hit
GGTGGGTGGATCACTTGAGGTCAGGAGTTCGGGACCAGCCTGACCAACATG10.4524886877828055No Hit
GAAGGTTGCCTGGCTGGCCCAGCTCGGCTCGAATAAGGAGGCTTAGAGCTG10.4524886877828055No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGTCTCGCCAAGCAGCT10.4524886877828055No Hit
GCACTTGGGGAGGCTGAGGCGGTGGGAGAATCACTTGAGCCAAGGAGTTCA10.4524886877828055No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)