FastQCFastQC Report
Tue 7 May 2024
EGAF00006216035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6826
Total Bases348.1 kbp
Sequences flagged as poor quality0
Sequence length51
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC582885.37943158511574No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4226.182244359800762No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCT550.8057427483152653No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCTTCGCCAAGCGGC250.366246703779666No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC210.30764723117491943No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC170.24904775857017286No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC150.21974802226779958No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGC130.1904482859654263No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC110.16114854966305303No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGC90.13184881336067975No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC90.13184881336067975No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCAAAGCGGC90.13184881336067975No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGC90.13184881336067975No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGC80.11719894520949312No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTTCCTCGCCAAGCGGC80.11719894520949312No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGC70.10254907705830649No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT70.10254907705830649No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTATCTGCCTCGCCAAGCGGC70.10254907705830649No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)