FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216037

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216037
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences226
Sequences flagged as poor quality0
Sequence length51
%GC77

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11350.0No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT3113.716814159292035No Hit
GTCCAACCCTGTGATGATTGATGCCACTGCTTCCTTAAAAAGCAGTGGTAT3013.274336283185843No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT146.1946902654867255No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT114.867256637168142No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCT20.8849557522123894No Hit
GACTGGGAAACCCTGTCTCTTATACCACATCTGACGCTGCCGACGAAGGCT20.8849557522123894No Hit
GTCCAACCCTGTATGATTGATGCCACTGCTTCCTTAAAAAGCAGTGGTATC20.8849557522123894No Hit
CACCAACCCTCATATGAAAAATATACAAATATAAATCTAAAAAAGAAAGCT10.4424778761061947No Hit
GCTGGTGTTTGGTGATTTGAAGGGAAGGGGGTCTGAACCTCAGAAGCTTGT10.4424778761061947No Hit
TGCATATGAGCCTATGCAAGTCATTCACCAGTGTAACTGTGTTCCCTTAGG10.4424778761061947No Hit
GGGGGGTCGGTCGGTGTGGTCGAGGGTGGTTCGTTGGAGTGGGGGGGGGGG10.4424778761061947No Hit
GACTGGGAAACCCTGTCTCTTATACACATTGACGCTGCCGACGAAGGCTTA10.4424778761061947No Hit
GAAAAAGCATAGGCTATCAAAGCAAAAATAGGCAATTGGGATTATGTCAAG10.4424778761061947No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTTACGCTGCCGACGAATGCT10.4424778761061947No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGG10.4424778761061947No Hit
CTCTCGGGTGGAGTCTTCTGACAGCTGGTGCGCCTGCCCGGGAACATCCTC10.4424778761061947No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.4424778761061947No Hit
GAGTACATGGGGAATGTTCAAAATCATCCAGTTGGCCCTAGATATATCAAC10.4424778761061947No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGTG10.4424778761061947No Hit
GACTGGCACGCTCGTCGGCAGCGTCAGTATAGTGGACTGGGAAACCCTGTC10.4424778761061947No Hit
CCTTGAACCAGGCCCGGTAGCTCATTCCTGTAATACAAGCACTTTGGGAGG10.4424778761061947No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGACTCTGCCTCGCCAAGCAGCT10.4424778761061947No Hit
CATGGCCCGTAAACATTAACATAAACACAACAGAAGCAGCCGACCAATGCT10.4424778761061947No Hit
GACTGGCACGCTCCATGACTGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.4424778761061947No Hit
GTCCAACCCTGTGATGATTGATGGGCCGGTCATCTGTCTCTTATACACATC10.4424778761061947No Hit
GCCATAAGCAAGAGACATCATGTAAACATATGTGGCAGAGGGTCTATCCAG10.4424778761061947No Hit
GGGGGGTGGTGGCGATATGCTAGAATTCCAATCGTAAACCACCGAAGGTGA10.4424778761061947No Hit
GACTGGCACTTTGGGAGGCCGAGGCGGGTGGATTACCTGAGGTCAGGAGTT10.4424778761061947No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)