FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11168
Sequences flagged as poor quality0
Sequence length51
%GC68

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT1006090.07879656160458No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1651.4774355300859598No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT700.6267908309455587No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT460.41189111747851No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT300.26862464183381085No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT280.2507163323782235No Hit
GACTTGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT250.2238538681948424No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT180.16117478510028654No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT160.14326647564469913No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT150.13431232091690543No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT150.13431232091690543No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT150.13431232091690543No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT140.12535816618911175No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCATCGCCAAGCGGCT130.11640401146131805No Hit
ACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTC130.11640401146131805No Hit
GACTGGCACGCTCCATGACCGGCACAGCAGTCTCTGCCTCGCCAAGCGGCT120.10744985673352436No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)